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1yfl

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==T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped Base==
==T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped Base==
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<StructureSection load='1yfl' size='340' side='right' caption='[[1yfl]], [[Resolution|resolution]] 3.09&Aring;' scene=''>
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<StructureSection load='1yfl' size='340' side='right'caption='[[1yfl]], [[Resolution|resolution]] 3.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1yfl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpt4 Bpt4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YFL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YFL FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1yfl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YFL FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.09&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1q0s|1q0s]], [[1q0t|1q0t]], [[1yf3|1yf3]], [[1yfj|1yfj]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DAM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10665 BPT4])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yfl OCA], [https://pdbe.org/1yfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yfl RCSB], [https://www.ebi.ac.uk/pdbsum/1yfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yfl ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Site-specific_DNA-methyltransferase_(adenine-specific) Site-specific DNA-methyltransferase (adenine-specific)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.72 2.1.1.72] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yfl OCA], [http://pdbe.org/1yfl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yfl RCSB], [http://www.ebi.ac.uk/pdbsum/1yfl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yfl ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/DMA_BPT4 DMA_BPT4]] This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands.
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[https://www.uniprot.org/uniprot/DMA_BPT4 DMA_BPT4] This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</div>
</div>
<div class="pdbe-citations 1yfl" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1yfl" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[DNA adenine methylase|DNA adenine methylase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bpt4]]
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[[Category: Escherichia virus T4]]
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[[Category: Cheng, X]]
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[[Category: Large Structures]]
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[[Category: Hattman, S]]
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[[Category: Cheng X]]
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[[Category: Horton, J R]]
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[[Category: Hattman S]]
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[[Category: Jeltsch, A]]
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[[Category: Horton JR]]
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[[Category: Liebert, K]]
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[[Category: Jeltsch A]]
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[[Category: Base-flipping]]
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[[Category: Liebert K]]
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[[Category: Dna]]
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[[Category: Methyltransferase]]
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[[Category: Protein-dna complex]]
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[[Category: T4dam]]
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[[Category: Transferase-dna complex]]
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Current revision

T4Dam in Complex with Sinefungin and 16-mer Oligonucleotide Showing Semi-specific and Specific Contact and Flipped Base

PDB ID 1yfl

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