2bse
From Proteopedia
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==Structure of Lactococcal Bacteriophage p2 Receptor Binding Protein in complex with a llama VHH domain== | ==Structure of Lactococcal Bacteriophage p2 Receptor Binding Protein in complex with a llama VHH domain== | ||
- | <StructureSection load='2bse' size='340' side='right' caption='[[2bse]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='2bse' size='340' side='right'caption='[[2bse]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2bse]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2bse]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_virus_P2 Lactococcus virus P2] and [https://en.wikipedia.org/wiki/Lama_glama Lama glama]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BSE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BSE FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bse FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bse OCA], [https://pdbe.org/2bse PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bse RCSB], [https://www.ebi.ac.uk/pdbsum/2bse PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bse ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/RBP_BPLP2 RBP_BPLP2] Binds to the host phosphopolysaccharides at the onset of infection. Upon activation by calcium, the receptor binding proteins change their conformation, presenting their binding sites to the host, and a channel opens at the bottom of the baseplate for DNA ejection.<ref>PMID:20351260</ref> <ref>PMID:24027307</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bs/2bse_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bs/2bse_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</div> | </div> | ||
<div class="pdbe-citations 2bse" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 2bse" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Antibody 3D structures|Antibody 3D structures]] | ||
+ | *[[3D structures of non-human antibody|3D structures of non-human antibody]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Lactococcus virus P2]] |
- | [[Category: | + | [[Category: Lama glama]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Cambillau C]] |
- | [[Category: | + | [[Category: Desmyter A]] |
- | [[Category: | + | [[Category: Moineau S]] |
- | [[Category: | + | [[Category: Spinelli S]] |
- | [[Category: | + | [[Category: Verrips CT]] |
- | [[Category: | + | [[Category: De Haard HJW]] |
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Current revision
Structure of Lactococcal Bacteriophage p2 Receptor Binding Protein in complex with a llama VHH domain
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