This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5yvr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:38, 22 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal Structure of the H277A mutant of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase==
==Crystal Structure of the H277A mutant of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase==
-
<StructureSection load='5yvr' size='340' side='right' caption='[[5yvr]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='5yvr' size='340' side='right'caption='[[5yvr]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5yvr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Candidate_divison_msbl1_archaeon_scgc-aaa259e19 Candidate divison msbl1 archaeon scgc-aaa259e19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YVR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YVR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5yvr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidate_division_MSBL1_archaeon_SCGC-AAA259E19 Candidate division MSBL1 archaeon SCGC-AAA259E19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YVR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YVR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.896&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5yvm|5yvm]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AKJ65_00115 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1698264 candidate divison MSBL1 archaeon SCGC-AAA259E19])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yvr OCA], [https://pdbe.org/5yvr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yvr RCSB], [https://www.ebi.ac.uk/pdbsum/5yvr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yvr ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yvr OCA], [http://pdbe.org/5yvr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yvr RCSB], [http://www.ebi.ac.uk/pdbsum/5yvr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yvr ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A133UP32_9EURY A0A133UP32_9EURY]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5yvr" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5yvr" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Candidate divison msbl1 archaeon scgc-aaa259e19]]
+
[[Category: Candidate division MSBL1 archaeon SCGC-AAA259E19]]
-
[[Category: Arold, S T]]
+
[[Category: Large Structures]]
-
[[Category: Eppinger, J]]
+
[[Category: Arold ST]]
-
[[Category: Frank, A]]
+
[[Category: Eppinger J]]
-
[[Category: Groetzinger, S W]]
+
[[Category: Frank A]]
-
[[Category: Groll, M]]
+
[[Category: Groetzinger SW]]
-
[[Category: Strillinger, E]]
+
[[Category: Groll M]]
-
[[Category: Dehydrogenase]]
+
[[Category: Strillinger E]]
-
[[Category: Halophilic]]
+
-
[[Category: Mutant]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein-cofactor complex]]
+
-
[[Category: Thermophilic]]
+

Current revision

Crystal Structure of the H277A mutant of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase

PDB ID 5yvr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5yvr"
Personal tools