1oge

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:00, 9 May 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==The Structure of Bacillus subtilis RbsD complexed with Ribose 5-phosphate==
==The Structure of Bacillus subtilis RbsD complexed with Ribose 5-phosphate==
-
<StructureSection load='1oge' size='340' side='right' caption='[[1oge]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+
<StructureSection load='1oge' size='340' side='right'caption='[[1oge]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1oge]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1oge]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OGE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=RP5:5-O-PHOSPHONO-BETA-D-RIBOFURANOSE'>RP5</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ogc|1ogc]], [[1ogd|1ogd]], [[1ogf|1ogf]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=RP5:5-O-PHOSPHONO-BETA-D-RIBOFURANOSE'>RP5</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1oge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oge OCA], [http://pdbe.org/1oge PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1oge RCSB], [http://www.ebi.ac.uk/pdbsum/1oge PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1oge ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oge OCA], [https://pdbe.org/1oge PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oge RCSB], [https://www.ebi.ac.uk/pdbsum/1oge PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oge ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RBSD_BACSU RBSD_BACSU]] Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose (By similarity).[HAMAP-Rule:MF_01661]
+
[https://www.uniprot.org/uniprot/RBSD_BACSU RBSD_BACSU] Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose (By similarity).[HAMAP-Rule:MF_01661]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 29: Line 29:
</div>
</div>
<div class="pdbe-citations 1oge" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1oge" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ribose-binding protein|Ribose-binding protein]]
== References ==
== References ==
<references/>
<references/>
Line 34: Line 37:
</StructureSection>
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Kim, M S]]
+
[[Category: Large Structures]]
-
[[Category: Oh, B H]]
+
[[Category: Kim M-S]]
-
[[Category: Ribose 5-phosphate]]
+
[[Category: Oh B-H]]
-
[[Category: Sugar transport]]
+
-
[[Category: Transport]]
+

Current revision

The Structure of Bacillus subtilis RbsD complexed with Ribose 5-phosphate

PDB ID 1oge

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools