This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1o7o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:29, 13 December 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Roles of Individual Residues of Alpha-1,3 Galactosyltransferases in Substrate Binding and Catalysis==
==Roles of Individual Residues of Alpha-1,3 Galactosyltransferases in Substrate Binding and Catalysis==
-
<StructureSection load='1o7o' size='340' side='right' caption='[[1o7o]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
+
<StructureSection load='1o7o' size='340' side='right'caption='[[1o7o]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1o7o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O7O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1O7O FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1o7o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O7O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O7O FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LAT:BETA-LACTOSE'>LAT</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1fg5|1fg5]], [[1g8o|1g8o]], [[1g93|1g93]], [[1gwv|1gwv]], [[1gww|1gww]], [[1gx0|1gx0]], [[1gx4|1gx4]], [[1k4v|1k4v]], [[1o7q|1o7q]], [[1o7r|1o7r]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PRD_900004:beta-lactose'>PRD_900004</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetyllactosaminide_3-alpha-galactosyltransferase N-acetyllactosaminide 3-alpha-galactosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.87 2.4.1.87] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o7o OCA], [https://pdbe.org/1o7o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o7o RCSB], [https://www.ebi.ac.uk/pdbsum/1o7o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o7o ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1o7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o7o OCA], [http://pdbe.org/1o7o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1o7o RCSB], [http://www.ebi.ac.uk/pdbsum/1o7o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1o7o ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GGTA1_BOVIN GGTA1_BOVIN]] Transfer of galactose from UDP-galactose to an acceptor molecule (R).
+
[https://www.uniprot.org/uniprot/GGTA1_BOVIN GGTA1_BOVIN] Transfer of galactose from UDP-galactose to an acceptor molecule (R).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 1o7o" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1o7o" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bovin]]
+
[[Category: Bos taurus]]
-
[[Category: N-acetyllactosaminide 3-alpha-galactosyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Acharya, K R]]
+
[[Category: Acharya KR]]
-
[[Category: Brew, K]]
+
[[Category: Brew K]]
-
[[Category: Deshpande, A]]
+
[[Category: Deshpande A]]
-
[[Category: Natesh, R]]
+
[[Category: Natesh R]]
-
[[Category: Swaminathan, G J]]
+
[[Category: Swaminathan GJ]]
-
[[Category: Xie, Z]]
+
[[Category: Xie Z]]
-
[[Category: Zhang, Y]]
+
[[Category: Zhang Y]]
-
[[Category: Glycoprotein]]
+
-
[[Category: Glycosyltransferase]]
+
-
[[Category: Transferase]]
+

Current revision

Roles of Individual Residues of Alpha-1,3 Galactosyltransferases in Substrate Binding and Catalysis

PDB ID 1o7o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools