1nhn
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA== | ==THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA== | ||
| - | <StructureSection load='1nhn' size='340' side='right' caption='[[1nhn | + | <StructureSection load='1nhn' size='340' side='right'caption='[[1nhn]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1nhn]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1nhn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cricetulus_griseus Cricetulus griseus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NHN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NHN FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nhn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nhn OCA], [https://pdbe.org/1nhn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nhn RCSB], [https://www.ebi.ac.uk/pdbsum/1nhn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nhn ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/HMGB1_CRIGR HMGB1_CRIGR] DNA binding proteins that associates with chromatin and has the ability to bend DNA. Binds preferentially single-stranded DNA. Involved in V(D)J recombination by acting as a cofactor of the RAG complex. Acts by stimulating cleavage and RAG protein binding at the 23 bp spacer of conserved recombination signal sequences (RSS). Heparin-binding protein that has a role in the extension of neurite-type cytoplasmic processes in developing cells (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 20: | Line 19: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nhn ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nhn ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[High mobility group protein|High mobility group protein]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Cricetulus griseus]] |
| - | [[Category: Carillo | + | [[Category: Large Structures]] |
| - | [[Category: Cary | + | [[Category: Carillo MOM]] |
| - | [[Category: Crane-Robinson | + | [[Category: Cary PD]] |
| - | [[Category: Driscoll | + | [[Category: Crane-Robinson C]] |
| - | [[Category: Norman | + | [[Category: Driscoll PC]] |
| - | [[Category: Read | + | [[Category: Norman DG]] |
| - | + | [[Category: Read CM]] | |
Current revision
THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA
| |||||||||||
