Sandbox Reserved 1392

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{{Sandbox_Reserved_HLSC322}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
{{Sandbox_Reserved_HLSC322}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
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==DNA Structure==
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==Human E-cadherin Protein==
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<StructureSection load='1bna' size='340' side='right' caption='Caption for this structure' scene=''>
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<StructureSection load='2o72' size='340' side='right' caption='Caption for this structure' scene=''>
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This is a default text for your page ''''''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
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You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
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== Function ==
== Function ==
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== Disease ==
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Epithelial-cadherin (1-213), or E-cadherin is a calcium-dependent cell adhesion protein. E-cadherin regulates cell-to-cell interactions, adhesion of bacteria to mammalian cells, and cell mobility. E-cadherin also plays a crucial role in the normal blastula formation in several animal cells.
== Relevance ==
== Relevance ==
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E-cadherin is a tumor suppressor gene. Degradation or loss of function of the gene is associated with increased proliferation and metastasis of tumors. Since E-cadherin is related to the adhesion strength within epithelial tissue, a decrease in the ability or quantity of E-cadherin allows for increased cell mobility. This may allow cancerous cells to proliferate more rapidly and invade nearby tissues at a higher rate. Mutations in the E-cadherin protein are linked to a series of cancers, including gastric, thyroid, colorectal, breast, and ovarian cancers.
== Structural highlights ==
== Structural highlights ==
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DNA is made up of <scene name='77/777712/Base_pairs_of_dna/1'>[[base pairs]</scene>].
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E-cadherin 1 is 213 amino acids long. E-cadherin is composed of five cadherin extensions, a transmembrane region, and a cytoplasmic tail. E-cadherin cell-to-cell junctions are often located close to actin-filaments within the cytoskeleton of a cell.
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This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
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<scene name='77/777712/Backbone_of_molecule/1'>Back bone of E-cadherin</scene>
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The backbone of human E-cadherin is made up of two major parts, the beta-sheets and the helix region. Beta- sheets are a secondary structure in the E-cadherin molecule. Binding between beta-sheet regions of different E-cadherin molecules helps facilitate intermolecular adhesion. Beta-sheets allow binding between E-cadherin molecules in both monomer and dimer states (i.e. can bind as single molecules or to a chain of already bound molecules.) <scene name='77/777712/Beta-sheets/1'>Beta sheets</scene>
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</StructureSection>
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The helix region of the E-cadherin molecule prevents the abnormal regulation of the junction complex, thus ensuring complete and correct translation of the spliced mRNA into protein. <scene name='77/777712/Helix_region/1'>Helix Region</scene>
== References ==
== References ==
<references/>
<references/>
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https://www.ebi.ac.uk/pdbe/entry/pdb/2o72/biology
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http://www.uniprot.org/uniprot/P12830
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https://en.wikipedia.org/wiki/CDH1_(gene)

Current revision

This Sandbox is Reserved from January through July 31, 2018 for use in the course HLSC322: Principles of Genetics and Genomics taught by Genevieve Houston-Ludlam at the University of Maryland, College Park, USA. This reservation includes Sandbox Reserved 1311 through Sandbox Reserved 1430.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

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Human E-cadherin Protein

Caption for this structure

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