5xda
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Structural basis for Ufm1 recognition by UfSP== | |
| + | <StructureSection load='5xda' size='340' side='right'caption='[[5xda]], [[Resolution|resolution]] 3.29Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5xda]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XDA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XDA FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.285Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xda FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xda OCA], [https://pdbe.org/5xda PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xda RCSB], [https://www.ebi.ac.uk/pdbsum/5xda PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xda ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/UFSP_CAEEL UFSP_CAEEL] Thiol protease which recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ufm-1, a ubiquitin-like modifier protein bound to a number of target proteins (By similarity). Required, with oct-4, for the localization of a subset of 7 transmembrane domain odorant receptors, including odr-10, to the cilia of olfactory neurons AWA and AWC. Operates in aggregation behavior, and responses to oxygen levels.[UniProtKB:Q9NUQ7]<ref>PMID:12410303</ref> <ref>PMID:24603482</ref> <ref>PMID:9590179</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Ubiquitin and ubiquitin-like proteins (Ubls) are involved in a variety of cellular functions, and dysfunction of these proteins often leads to disease, thus requiring the precise molecular recognition of the partner. Here, we report a structural basis for the recognition of Ufm1 by the Ufm1-specific protease (UfSP), both from Caenorhabditis elegans. Ufm1 functions in endoplasmic reticulum homeostasis, cell cycle regulation, and dysfunctions of this protein can result in breast cancer and neurological disorders. The structure reveals that in addition to the extended beta-structure at the C-terminus of cUfm1, the interactions made by the completely conserved residues in Ufm1 orthologs, Pro88-Val92, corresponding to P6-P2 positions from the cleavage site, seem to be important for the specific recognition of Ufm1 by cUfSP. | ||
| - | + | Structural basis for Ufm1 recognition by UfSP.,Kim KH, Ha BH, Kim EE FEBS Lett. 2018 Jan;592(2):263-273. doi: 10.1002/1873-3468.12951. Epub 2018 Jan, 4. PMID:29251776<ref>PMID:29251776</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 5xda" style="background-color:#fffaf0;"></div> |
| - | [[Category: Kim | + | |
| - | [[Category: | + | ==See Also== |
| + | *[[Ubiquitin-fold modifier 3D structures|Ubiquitin-fold modifier 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Caenorhabditis elegans]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Ha BH]] | ||
| + | [[Category: Kim EE]] | ||
| + | [[Category: Kim KH]] | ||
Current revision
Structural basis for Ufm1 recognition by UfSP
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