This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2efv
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2efv.jpg|left|200px]] | ||
| - | + | ==Crystal Structure of a Hypothetical Protein(MJ0366) from Methanocaldococcus jannaschii== | |
| - | + | <StructureSection load='2efv' size='340' side='right'caption='[[2efv]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2efv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EFV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EFV FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2efv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2efv OCA], [https://pdbe.org/2efv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2efv RCSB], [https://www.ebi.ac.uk/pdbsum/2efv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2efv ProSAT], [https://www.topsan.org/Proteins/RSGI/2efv TOPSAN]</span></td></tr> | |
| - | | | + | </table> |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/Y366_METJA Y366_METJA] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | == | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/2efv_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: Karthe | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2efv ConSurf]. |
| - | [[Category: Kumarevel | + | <div style="clear:both"></div> |
| - | [[Category: Kuramitsu | + | __TOC__ |
| - | + | </StructureSection> | |
| - | [[Category: Yokoyama | + | [[Category: Large Structures]] |
| - | + | [[Category: Methanocaldococcus jannaschii DSM 2661]] | |
| - | + | [[Category: Karthe P]] | |
| - | + | [[Category: Kumarevel TS]] | |
| - | + | [[Category: Kuramitsu S]] | |
| - | + | [[Category: Yokoyama S]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of a Hypothetical Protein(MJ0366) from Methanocaldococcus jannaschii
| |||||||||||
