6fp3

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(New page: '''Unreleased structure''' The entry 6fp3 is ON HOLD Authors: Saleem-Batcha, R., Teufel, R. Description: The crystal structure of EncM complexed with dioxygen under 5 bar of oxygen pre...)
Current revision (12:30, 9 May 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6fp3 is ON HOLD
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==The crystal structure of EncM complexed with dioxygen under 5 bar of oxygen pressure.==
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<StructureSection load='6fp3' size='340' side='right'caption='[[6fp3]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6fp3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_maritimus Streptomyces maritimus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FP3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FP3 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.976&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fp3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fp3 OCA], [https://pdbe.org/6fp3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fp3 RCSB], [https://www.ebi.ac.uk/pdbsum/6fp3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fp3 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q9KHK2_9ACTN Q9KHK2_9ACTN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The reactions of enzymes and cofactors with gaseous molecules such as dioxygen (O2) are challenging to study and remain among the most contentious subjects in biochemistry. To date, it is largely enigmatic how enzymes control and fine-tune their reactions with O2, as exemplified by the ubiquitous flavin-dependent enzymes that commonly facilitate redox chemistry such as the oxygenation of organic substrates. Here we employ O2-pressurized X-ray crystallography and quantum mechanical calculations to reveal how the precise positioning of O2 within a flavoenzyme's active site enables the regiospecific formation of a covalent flavin-oxygen adduct and oxygenating species (i.e., the flavin-N5-oxide) by mimicking a critical transition state. This study unambiguously demonstrates how enzymes may control the O2 functionalization of an organic cofactor as prerequisite for oxidative catalysis. Our work thus illustrates how O2 reactivity can be harnessed in an enzymatic environment and provides crucial knowledge for future rational design of O2-reactive enzymes.
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Authors: Saleem-Batcha, R., Teufel, R.
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Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.,Saleem-Batcha R, Stull F, Sanders JN, Moore BS, Palfey BA, Houk KN, Teufel R Proc Natl Acad Sci U S A. 2018 Apr 23. pii: 1801189115. doi:, 10.1073/pnas.1801189115. PMID:29686059<ref>PMID:29686059</ref>
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Description: The crystal structure of EncM complexed with dioxygen under 5 bar of oxygen pressure.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Teufel, R]]
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<div class="pdbe-citations 6fp3" style="background-color:#fffaf0;"></div>
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[[Category: Saleem-Batcha, R]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Streptomyces maritimus]]
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[[Category: Saleem-Batcha R]]
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[[Category: Teufel R]]

Current revision

The crystal structure of EncM complexed with dioxygen under 5 bar of oxygen pressure.

PDB ID 6fp3

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