This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2eis

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:08, 10 February 2021) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2eis.jpg|left|200px]]
 
-
{{Structure
+
==X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8==
-
|PDB= 2eis |SIZE=350|CAPTION= <scene name='initialview01'>2eis</scene>, resolution 2.10&Aring;
+
<StructureSection load='2eis' size='340' side='right'caption='[[2eis]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=AC1:Coa+Binding+Site+For+Residue+A+201'>AC1</scene> and <scene name='pdbsite=AC2:Coa+Binding+Site+For+Residue+B+202'>AC2</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2eis]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EIS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EIS FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
-
|GENE= TTHB207 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TTHB207 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
-
|RELATEDENTRY=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eis OCA], [https://pdbe.org/2eis PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eis RCSB], [https://www.ebi.ac.uk/pdbsum/2eis PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eis ProSAT], [https://www.topsan.org/Proteins/RSGI/2eis TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eis OCA], [http://www.ebi.ac.uk/pdbsum/2eis PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2eis RCSB]</span>
+
</table>
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ei/2eis_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2EIS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EIS OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Thermus thermophilus]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eis ConSurf].
-
[[Category: Chen, L.]]
+
<div style="clear:both"></div>
-
[[Category: Chrzas, J.]]
+
__TOC__
-
[[Category: Ebihara, A.]]
+
</StructureSection>
-
[[Category: Fu, Z Q.]]
+
[[Category: Large Structures]]
-
[[Category: Iino, H.]]
+
[[Category: Thet8]]
-
[[Category: Kamitori, S.]]
+
[[Category: Chen, L]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Chrzas, J]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Ebihara, A]]
-
[[Category: Satoh, S.]]
+
[[Category: Fu, Z Q]]
-
[[Category: Wang, B C.]]
+
[[Category: Iino, H]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Kamitori, S]]
-
[[Category: Yoshida, H.]]
+
[[Category: Kuramitsu, S]]
-
[[Category: coa binding motif]]
+
[[Category: Structural genomic]]
-
[[Category: national project on protein structural and functional analyse]]
+
[[Category: Satoh, S]]
-
[[Category: nppsfa]]
+
[[Category: Wang, B C]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Yokoyama, S]]
-
[[Category: rsgi]]
+
[[Category: Yoshida, H]]
-
[[Category: structural genomic]]
+
[[Category: Coa binding motif]]
-
[[Category: unknown function]]
+
[[Category: National project on protein structural and functional analyse]]
-
 
+
[[Category: Nppsfa]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:49:48 2008''
+
[[Category: Rsgi]]
 +
[[Category: Unknown function]]

Current revision

X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8

PDB ID 2eis

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2eis"
Personal tools