This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4o9r
From Proteopedia
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Human Smoothened Receptor structure in complex with cyclopamine== | ==Human Smoothened Receptor structure in complex with cyclopamine== | ||
| - | <StructureSection load='4o9r' size='340' side='right' caption='[[4o9r]], [[Resolution|resolution]] 3.20Å' scene=''> | + | <StructureSection load='4o9r' size='340' side='right'caption='[[4o9r]], [[Resolution|resolution]] 3.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4o9r]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4o9r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4O9R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4O9R FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CY8:CYCLOPAMINE'>CY8</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.204Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CY8:CYCLOPAMINE'>CY8</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4o9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4o9r OCA], [https://pdbe.org/4o9r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4o9r RCSB], [https://www.ebi.ac.uk/pdbsum/4o9r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4o9r ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/SMO_HUMAN SMO_HUMAN] G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO). Required for the accumulation of KIF7 and GLI3 in the cilia.<ref>PMID:19592253</ref> [https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Escherichia coli]] |
| - | [[Category: Barty | + | [[Category: Homo sapiens]] |
| - | [[Category: Basu | + | [[Category: Large Structures]] |
| - | [[Category: Beyerlein | + | [[Category: Barty A]] |
| - | [[Category: Boutet | + | [[Category: Basu S]] |
| - | [[Category: Caffrey | + | [[Category: Beyerlein KR]] |
| - | [[Category: Chapman | + | [[Category: Boutet S]] |
| - | [[Category: Cherezov | + | [[Category: Caffrey M]] |
| - | [[Category: Doak | + | [[Category: Chapman HN]] |
| - | [[Category: Fromme | + | [[Category: Cherezov V]] |
| - | [[Category: Fromme | + | [[Category: Doak RB]] |
| - | + | [[Category: Fromme P]] | |
| - | [[Category: Gati | + | [[Category: Fromme R]] |
| - | [[Category: Grotjohann | + | [[Category: Gati C]] |
| - | [[Category: Han | + | [[Category: Grotjohann I]] |
| - | [[Category: Howe | + | [[Category: Han GW]] |
| - | [[Category: James | + | [[Category: Howe N]] |
| - | [[Category: Katritch | + | [[Category: James D]] |
| - | [[Category: Kirian | + | [[Category: Katritch V]] |
| - | [[Category: Klinker | + | [[Category: Kirian RA]] |
| - | [[Category: Koglin | + | [[Category: Klinker M]] |
| - | [[Category: Kupitz | + | [[Category: Koglin JE]] |
| - | [[Category: Li | + | [[Category: Kupitz C]] |
| - | [[Category: Liu | + | [[Category: Li D]] |
| - | [[Category: Liu | + | [[Category: Liu H]] |
| - | [[Category: Messerschmidt | + | [[Category: Liu W]] |
| - | [[Category: Nelson | + | [[Category: Messerschmidt M]] |
| - | [[Category: Seibert | + | [[Category: Nelson G]] |
| - | [[Category: Shah | + | [[Category: Seibert MM]] |
| - | [[Category: Shoeman | + | [[Category: Shah STA]] |
| - | [[Category: Spence | + | [[Category: Shoeman RL]] |
| - | [[Category: Stevens | + | [[Category: Spence JCH]] |
| - | [[Category: Wacker | + | [[Category: Stevens RC]] |
| - | [[Category: Wang | + | [[Category: Wacker D]] |
| - | [[Category: Wang | + | [[Category: Wang C]] |
| - | [[Category: Weierstall | + | [[Category: Wang D]] |
| - | [[Category: White | + | [[Category: Weierstall U]] |
| - | [[Category: Willams | + | [[Category: White TA]] |
| - | [[Category: Zatsepin | + | [[Category: Willams GJ]] |
| - | + | [[Category: Zatsepin NA]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Human Smoothened Receptor structure in complex with cyclopamine
| |||||||||||
Categories: Escherichia coli | Homo sapiens | Large Structures | Barty A | Basu S | Beyerlein KR | Boutet S | Caffrey M | Chapman HN | Cherezov V | Doak RB | Fromme P | Fromme R | Gati C | Grotjohann I | Han GW | Howe N | James D | Katritch V | Kirian RA | Klinker M | Koglin JE | Kupitz C | Li D | Liu H | Liu W | Messerschmidt M | Nelson G | Seibert MM | Shah STA | Shoeman RL | Spence JCH | Stevens RC | Wacker D | Wang C | Wang D | Weierstall U | White TA | Willams GJ | Zatsepin NA
