Sandbox Reserved 1376
From Proteopedia
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- | ==SAHS protein from Ramazzottius varieornatus== | + | ==5xn9, SAHS protein from Ramazzottius varieornatus== |
<StructureSection load='5xn9' size='340' side='right' caption='crystal structure' scene=''> | <StructureSection load='5xn9' size='340' side='right' caption='crystal structure' scene=''> | ||
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== Function == | == Function == | ||
- | Tardigrades (Ramazzottius varieornatus, informally known as water bears, are viewed as the most resilient organisms on the planet. They have the capability to shut down metabolic processes and undergo anydrobiosis, a dehydrated state in which they can exist even in the vacuum of space. One of the secrets to their success may be 5xn9, a secreted heat soluble protein. The protein shields organelles and extracellular components during dehydration to improve desiccation tolerance and prevent crystallization. | + | Tardigrades ''(Ramazzottius varieornatus)'', informally known as water bears, are viewed as the most resilient organisms on the planet. They have the capability to shut down metabolic processes and undergo anydrobiosis, a dehydrated state in which they can exist even in the vacuum of space. One of the secrets to their success may be '''5xn9''', a secreted heat soluble protein. The protein shields organelles and extracellular components during dehydration to improve desiccation tolerance and prevent crystallization. |
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== Structural highlights == | == Structural highlights == | ||
+ | The 5xn9 protein derives its function primarily from several key sites. The first are the <scene name='77/777696/Beta_barrel/2'>beta barrels</scene>, two large beta-sheets that coil to form a barrel-like structure that allows hydrophobic residues to form unusual networks of hydrogen bonds. | ||
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+ | Beta barrels are commonly seen in membrane proteins and often contain alternating residues of hydrophobic and hydrophilic amino acids, as can be seen <scene name='77/777696/Hydrophobic/1'>here</scene> with hydrophobic regions in red and hydrophilic regions in turquoise. The particular beta barrel on 5xn9 is very similar to that of '''fatty acid binding proteins (FABPs)'''. | ||
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+ | Other components of interests on 5xn9 include <scene name='77/777696/Ions/2'>Zn and Mg</scene> protein modification binding sites. Zinc is shown in blue and magnesium in magenta. These and other post-translational modifications play an important role in determining the structure of 5xn9 and improving its tolerance to dehydration. | ||
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== References == | == References == | ||
<references/> | <references/> | ||
+ | Fukuda, Y., Miura, Y., Mizohata, E. and Inoue, T. (2017), Structural insights into a secretory abundant heat-soluble protein from an anhydrobiotic tardigrade, ''Ramazzottius varieornatus''. FEBS Lett, 591: 2458–2469. doi:10.1002/1873-3468.12752 |
Current revision
5xn9, SAHS protein from Ramazzottius varieornatus
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References
Fukuda, Y., Miura, Y., Mizohata, E. and Inoue, T. (2017), Structural insights into a secretory abundant heat-soluble protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus. FEBS Lett, 591: 2458–2469. doi:10.1002/1873-3468.12752