2eym

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:20, 14 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2eym.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of Staphylococcal nuclease mutant T120C==
-
|PDB= 2eym |SIZE=350|CAPTION= <scene name='initialview01'>2eym</scene>, resolution 1.80&Aring;
+
<StructureSection load='2eym' size='340' side='right'caption='[[2eym]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2eym]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EYM FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Micrococcal_nuclease Micrococcal nuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.31.1 3.1.31.1] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
|GENE= nuc ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eym OCA], [https://pdbe.org/2eym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eym RCSB], [https://www.ebi.ac.uk/pdbsum/2eym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eym ProSAT]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=[[1ey0|1EY0]], [[2exz|2EXZ]], [[2ey1|2EY1]], [[2ey2|2EY2]], [[2ey5|2EY5]], [[2ey6|2EY6]], [[2eyf|2EYF]], [[2eyh|2EYH]], [[2eyj|2EYJ]], [[2eyl|2EYL]], [[2eyo|2EYO]], [[2eyp|2EYP]], [[2f0d|2F0D]], [[2f0e|2F0E]], [[2f0f|2F0F]], [[2f0g|2F0G]], [[2f0h|2F0H]], [[2f0i|2F0I]], [[2f0j|2F0J]], [[2f0k|2F0K]], [[2f0l|2F0L]], [[2f0m|2F0M]], [[2f0n|2F0N]], [[2f0o|2F0O]], [[2f0p|2F0P]], [[2f0q|2F0Q]], [[2f0s|2F0S]], [[2f0t|2F0T]], [[2f0u|2F0U]], [[2f0v|2F0V]], [[2f0w|2F0W]]
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eym OCA], [http://www.ebi.ac.uk/pdbsum/2eym PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2eym RCSB]</span>
+
[https://www.uniprot.org/uniprot/NUC_STAAU NUC_STAAU] Enzyme that catalyzes the hydrolysis of both DNA and RNA at the 5' position of the phosphodiester bond.
-
}}
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ey/2eym_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eym ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of Staphylococcal nuclease mutant T120C'''
+
==See Also==
-
 
+
*[[Staphylococcal nuclease 3D structures|Staphylococcal nuclease 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2EYM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EYM OCA].
+
[[Category: Large Structures]]
-
[[Category: Micrococcal nuclease]]
+
-
[[Category: Single protein]]
+
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Lu, J Z.]]
+
[[Category: Lu JZ]]
-
[[Category: Sakon, J.]]
+
[[Category: Sakon J]]
-
[[Category: Stites, W E.]]
+
[[Category: Stites WE]]
-
[[Category: calcium]]
+
-
[[Category: dna hydrolase]]
+
-
[[Category: endonuclease]]
+
-
[[Category: rna hydrolase]]
+
-
[[Category: signal]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:55:30 2008''
+

Current revision

Crystal structure of Staphylococcal nuclease mutant T120C

PDB ID 2eym

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2eym"
Personal tools