2klr
From Proteopedia
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==Solid-state NMR structure of the alpha-crystallin domain in alphaB-crystallin oligomers== | ==Solid-state NMR structure of the alpha-crystallin domain in alphaB-crystallin oligomers== | ||
- | <StructureSection load='2klr' size='340' side='right' caption='[[2klr | + | <StructureSection load='2klr' size='340' side='right'caption='[[2klr]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2klr]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2klr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KLR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KLR FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solid-state NMR</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2klr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2klr OCA], [https://pdbe.org/2klr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2klr RCSB], [https://www.ebi.ac.uk/pdbsum/2klr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2klr ProSAT]</span></td></tr> |
</table> | </table> | ||
== Disease == | == Disease == | ||
- | [ | + | [https://www.uniprot.org/uniprot/CRYAB_HUMAN CRYAB_HUMAN] Posterior polar cataract;Alpha-crystallinopathy;Zonular cataract;Familial isolated dilated cardiomyopathy;Fatal infantile hypertonic myofibrillar myopathy. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry. |
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/CRYAB_HUMAN CRYAB_HUMAN] May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2klr ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2klr ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The small heat shock protein alphaB-crystallin (alphaB) contributes to cellular protection against stress. For decades, high-resolution structural studies on oligomeric alphaB have been confounded by its polydisperse nature. Here, we present a structural basis of oligomer assembly and activation of the chaperone using solid-state NMR and small-angle X-ray scattering (SAXS). The basic building block is a curved dimer, with an angle of approximately 121 degrees between the planes of the beta-sandwich formed by alpha-crystallin domains. The highly conserved IXI motif covers a substrate binding site at pH 7.5. We observe a pH-dependent modulation of the interaction of the IXI motif with beta4 and beta8, consistent with a pH-dependent regulation of the chaperone function. N-terminal region residues Ser59-Trp60-Phe61 are involved in intermolecular interaction with beta3. Intermolecular restraints from NMR and volumetric restraints from SAXS were combined to calculate a model of a 24-subunit alphaB oligomer with tetrahedral symmetry. | ||
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- | Solid-state NMR and SAXS studies provide a structural basis for the activation of alphaB-crystallin oligomers.,Jehle S, Rajagopal P, Bardiaux B, Markovic S, Kuhne R, Stout JR, Higman VA, Klevit RE, van Rossum BJ, Oschkinat H Nat Struct Mol Biol. 2010 Sep;17(9):1037-42. Epub 2010 Aug 29. PMID:20802487<ref>PMID:20802487</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 2klr" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Art:Focusing on Crystallin|Art:Focusing on Crystallin]] | *[[Art:Focusing on Crystallin|Art:Focusing on Crystallin]] | ||
- | + | *[[Crystallin 3D structures|Crystallin 3D structures]] | |
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: Bardiaux | + | [[Category: Large Structures]] |
- | [[Category: Higman | + | [[Category: Bardiaux B]] |
- | [[Category: Jehle | + | [[Category: Higman VA]] |
- | [[Category: Klevit | + | [[Category: Jehle S]] |
- | [[Category: Kuehne | + | [[Category: Klevit RE]] |
- | [[Category: Markovic | + | [[Category: Kuehne R]] |
- | [[Category: Oschkinat | + | [[Category: Markovic S]] |
- | [[Category: Rajagopal | + | [[Category: Oschkinat H]] |
- | [[Category: Rossum | + | [[Category: Rajagopal P]] |
- | + | [[Category: Van Rossum B]] | |
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Current revision
Solid-state NMR structure of the alpha-crystallin domain in alphaB-crystallin oligomers
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Categories: Homo sapiens | Large Structures | Bardiaux B | Higman VA | Jehle S | Klevit RE | Kuehne R | Markovic S | Oschkinat H | Rajagopal P | Van Rossum B