This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sfd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:16, 23 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==oxidized form of amicyanin mutant P94F==
==oxidized form of amicyanin mutant P94F==
-
<StructureSection load='1sfd' size='340' side='right' caption='[[1sfd]], [[Resolution|resolution]] 0.99&Aring;' scene=''>
+
<StructureSection load='1sfd' size='340' side='right'caption='[[1sfd]], [[Resolution|resolution]] 0.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1sfd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_17741 Atcc 17741]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1SFD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1sfd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paracoccus_denitrificans Paracoccus denitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SFD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.99&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1sf3|1sf3]], [[1sfh|1sfh]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MAUC, AMI ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266 ATCC 17741])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sfd OCA], [https://pdbe.org/1sfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sfd RCSB], [https://www.ebi.ac.uk/pdbsum/1sfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sfd ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1sfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sfd OCA], [http://pdbe.org/1sfd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1sfd RCSB], [http://www.ebi.ac.uk/pdbsum/1sfd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1sfd ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/AMCY_PARDE AMCY_PARDE]] Primary acceptor of electrons from methylamine dehydrogenase. Passes those electrons on either a soluble cytochrome c or to pseudoazurin.
+
[https://www.uniprot.org/uniprot/AMCY_PARDE AMCY_PARDE] Primary acceptor of electrons from methylamine dehydrogenase. Passes those electrons on either a soluble cytochrome c or to pseudoazurin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 30: Line 29:
</div>
</div>
<div class="pdbe-citations 1sfd" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1sfd" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Amicyanin 3D structures|Amicyanin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 17741]]
+
[[Category: Large Structures]]
-
[[Category: Carrell, C J]]
+
[[Category: Paracoccus denitrificans]]
-
[[Category: Davidson, V L]]
+
[[Category: Carrell CJ]]
-
[[Category: Jiang, S]]
+
[[Category: Davidson VL]]
-
[[Category: Mathews, F S]]
+
[[Category: Jiang S]]
-
[[Category: Sun, D]]
+
[[Category: Mathews FS]]
-
[[Category: Beta sandwich]]
+
[[Category: Sun D]]
-
[[Category: Blue copper protein]]
+
-
[[Category: Electron transport]]
+

Current revision

oxidized form of amicyanin mutant P94F

PDB ID 1sfd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools