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1s7d
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==Crystal structure of refined tetragonal crystal of YodA from Escherichia coli== | ==Crystal structure of refined tetragonal crystal of YodA from Escherichia coli== | ||
| - | <StructureSection load='1s7d' size='340' side='right' caption='[[1s7d]], [[Resolution|resolution]] 2.17Å' scene=''> | + | <StructureSection load='1s7d' size='340' side='right'caption='[[1s7d]], [[Resolution|resolution]] 2.17Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1s7d]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1s7d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S7D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S7D FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.17Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s7d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s7d OCA], [https://pdbe.org/1s7d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s7d RCSB], [https://www.ebi.ac.uk/pdbsum/1s7d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s7d ProSAT], [https://www.topsan.org/Proteins/BSGC/1s7d TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/ZINT_ECOLI ZINT_ECOLI] May function as a periplasmic zinc chaperone or mediate direct transport of zinc from the periplasm to the cytoplasm under zinc-limited conditions. Binds zinc with high affinity, and can also bind cadmium, mercury or nickel. Preferentially binds Zn(2+) over Cd(2+). Contains one high affinity metal binding site, and can bind additional metal ions at other sites.<ref>PMID:17931600</ref> <ref>PMID:19377097</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Escherichia coli]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Kim | + | [[Category: Kim R]] |
| - | [[Category: Kim | + | [[Category: Kim SH]] |
| - | [[Category: Shin | + | [[Category: Shin DH]] |
| - | [[Category: Yokota | + | [[Category: Yokota H]] |
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Current revision
Crystal structure of refined tetragonal crystal of YodA from Escherichia coli
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Categories: Escherichia coli | Large Structures | Kim R | Kim SH | Shin DH | Yokota H
