This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5yog

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:34, 22 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of flavodoxin with engineered disulfide bond N14C-C93==
==Crystal Structure of flavodoxin with engineered disulfide bond N14C-C93==
-
<StructureSection load='5yog' size='340' side='right' caption='[[5yog]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
+
<StructureSection load='5yog' size='340' side='right'caption='[[5yog]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5yog]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YOG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YOG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5yog]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YOG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.42&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5yob|5yob]], [[5yoc|5yoc]], [[5yoe|5yoe]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yog OCA], [http://pdbe.org/5yog PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yog RCSB], [http://www.ebi.ac.uk/pdbsum/5yog PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yog ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yog OCA], [https://pdbe.org/5yog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yog RCSB], [https://www.ebi.ac.uk/pdbsum/5yog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yog ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FLAV_DESVH FLAV_DESVH]] Low-potential electron donor to a number of redox enzymes.
+
[https://www.uniprot.org/uniprot/FLAV_DESVH FLAV_DESVH] Low-potential electron donor to a number of redox enzymes.
 +
 
 +
==See Also==
 +
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Liu, Z J]]
+
[[Category: Desulfovibrio vulgaris str. Hildenborough]]
-
[[Category: Pu, M]]
+
[[Category: Large Structures]]
-
[[Category: Song, G]]
+
[[Category: Liu ZJ]]
-
[[Category: Xu, Z]]
+
[[Category: Pu M]]
-
[[Category: Electron transport]]
+
[[Category: Song G]]
-
[[Category: Fmn-binding protein]]
+
[[Category: Xu Z]]
-
[[Category: Fusion partner]]
+
-
[[Category: Oxidation]]
+

Current revision

Crystal Structure of flavodoxin with engineered disulfide bond N14C-C93

PDB ID 5yog

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools