This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ftz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:54, 20 September 2023) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ftz.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of Geranyltranstransferase (EC 2.5.1.10) (tm0161) from THERMOTOGA MARITIMA at 1.90 A resolution==
-
|PDB= 2ftz |SIZE=350|CAPTION= <scene name='initialview01'>2ftz</scene>, resolution 1.900&Aring;
+
<StructureSection load='2ftz' size='340' side='right'caption='[[2ftz]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene>
+
<table><tr><td colspan='2'>[[2ftz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FTZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FTZ FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Geranyltranstransferase Geranyltranstransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.10 2.5.1.10] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
|GENE= tm0161 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 Thermotoga maritima MSB8])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00685 Trans_IPPS_HT]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ftz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ftz OCA], [https://pdbe.org/2ftz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ftz RCSB], [https://www.ebi.ac.uk/pdbsum/2ftz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ftz ProSAT], [https://www.topsan.org/Proteins/JCSG/2ftz TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ftz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ftz OCA], [http://www.ebi.ac.uk/pdbsum/2ftz PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ftz RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q9WY08_THEMA Q9WY08_THEMA]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of Geranyltranstransferase (EC 2.5.1.10) (tm0161) from THERMOTOGA MARITIMA at 1.90 A resolution'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ft/2ftz_consurf.spt"</scriptWhenChecked>
-
2FTZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima_msb8 Thermotoga maritima msb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FTZ OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Geranyltranstransferase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Thermotoga maritima msb8]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ftz ConSurf].
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: geranyltranstransferase (ec 2 5.1 10)]]
+
__TOC__
-
[[Category: jcsg]]
+
</StructureSection>
-
[[Category: joint center for structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: protein structure initiative]]
+
[[Category: Thermotoga maritima MSB8]]
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: tm0161]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:07:37 2008''
+

Current revision

Crystal structure of Geranyltranstransferase (EC 2.5.1.10) (tm0161) from THERMOTOGA MARITIMA at 1.90 A resolution

PDB ID 2ftz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ftz"
Personal tools