This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6fxn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 6fxn is ON HOLD Authors: Lammens, A., Maskos, K., Willen, L., Jiang, X., Schneider, P. Description: Crystal structure of human BAFF in complex with...)
Current revision (05:49, 4 April 2018) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6fxn is ON HOLD
+
==Crystal structure of human BAFF in complex with Fab fragment of anti-BAFF antibody belimumab==
 +
<StructureSection load='6fxn' size='340' side='right' caption='[[6fxn]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6fxn]] is a 18 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6erx 6erx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FXN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FXN FirstGlance]. <br>
 +
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fxn OCA], [http://pdbe.org/6fxn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fxn RCSB], [http://www.ebi.ac.uk/pdbsum/6fxn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fxn ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/TN13B_HUMAN TN13B_HUMAN]] Cytokine that binds to TNFRSF13B/TACI and TNFRSF17/BCMA. TNFSF13/APRIL binds to the same 2 receptors. Together, they form a 2 ligands -2 receptors pathway involved in the stimulation of B- and T-cell function and the regulation of humoral immunity. A third B-cell specific BAFF-receptor (BAFFR/BR3) promotes the survival of mature B-cells and the B-cell response.<ref>PMID:10973284</ref> Isoform 2 seems to inhibit isoform 1 secretion and bioactivity (By similarity).<ref>PMID:10973284</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The B cell survival factor (TNFSF13B/BAFF) is often elevated in autoimmune diseases and is targeted in the clinic for the treatment of systemic lupus erythematosus. BAFF contains a loop region designated the flap, which is dispensable for receptor binding. Here we show that the flap of BAFF has two functions. In addition to facilitating the formation of a highly active BAFF 60-mer as shown previously, it also converts binding of BAFF to TNFRSF13C (BAFFR) into a signaling event via oligomerization of individual BAFF-BAFFR complexes. Binding and activation of BAFFR can therefore be targeted independently to inhibit or activate the function of BAFF. Moreover, structural analyses suggest that the flap of BAFF 60-mer temporarily prevents binding of an anti-BAFF antibody (belimumab) but not of a decoy receptor (atacicept). The observed differences in profiles of BAFF inhibition may confer distinct biological and clinical efficacies to these therapeutically relevant inhibitors.
-
Authors: Lammens, A., Maskos, K., Willen, L., Jiang, X., Schneider, P.
+
A loop region of BAFF controls B cell survival and regulates recognition by different inhibitors.,Vigolo M, Chambers MG, Willen L, Chevalley D, Maskos K, Lammens A, Tardivel A, Das D, Kowalczyk-Quintas C, Schuepbach-Mallepell S, Smulski CR, Eslami M, Rolink A, Hummler E, Samy E, Fomekong Nanfack Y, Mackay F, Liao M, Hess H, Jiang X, Schneider P Nat Commun. 2018 Mar 23;9(1):1199. doi: 10.1038/s41467-018-03323-8. PMID:29572442<ref>PMID:29572442</ref>
-
Description: Crystal structure of human BAFF in complex with Fab fragment of anti-BAFF antibody belimumab
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6fxn" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Jiang, X]]
[[Category: Lammens, A]]
[[Category: Lammens, A]]
[[Category: Maskos, K]]
[[Category: Maskos, K]]
-
[[Category: Willen, L]]
 
[[Category: Schneider, P]]
[[Category: Schneider, P]]
-
[[Category: Jiang, X]]
+
[[Category: Willen, L]]
 +
[[Category: Antibody]]
 +
[[Category: B cell]]
 +
[[Category: Baff]]
 +
[[Category: Cytokine]]
 +
[[Category: Immune system]]
 +
[[Category: Immunology]]
 +
[[Category: Protero]]

Current revision

Crystal structure of human BAFF in complex with Fab fragment of anti-BAFF antibody belimumab

6fxn, resolution 2.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools