This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2fuv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:33, 3 March 2021) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fuv.gif|left|200px]]
 
-
{{Structure
+
==Phosphoglucomutase from Salmonella typhimurium.==
-
|PDB= 2fuv |SIZE=350|CAPTION= <scene name='initialview01'>2fuv</scene>, resolution 2.00&Aring;
+
<StructureSection load='2fuv' size='340' side='right'caption='[[2fuv]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2fuv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FUV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FUV FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoglucomutase Phosphoglucomutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.2 5.4.2.2] </span>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
|GENE= pgm ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=602 Salmonella typhimurium])
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02880 PGM_PMM_III], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02879 PGM_PMM_II], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07564 PRK07564], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00408 PGM_PMM_IV], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02878 PGM_PMM_I]</span>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pgm ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
-
|RELATEDENTRY=
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoglucomutase Phosphoglucomutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.2 5.4.2.2] </span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fuv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fuv OCA], [http://www.ebi.ac.uk/pdbsum/2fuv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2fuv RCSB]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fuv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fuv OCA], [https://pdbe.org/2fuv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fuv RCSB], [https://www.ebi.ac.uk/pdbsum/2fuv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fuv ProSAT], [https://www.topsan.org/Proteins/MCSG/2fuv TOPSAN]</span></td></tr>
-
}}
+
</table>
-
 
+
== Evolutionary Conservation ==
-
'''Phosphoglucomutase from Salmonella typhimurium.'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fu/2fuv_consurf.spt"</scriptWhenChecked>
-
2FUV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FUV OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fuv ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Phosphoglucomutase]]
[[Category: Phosphoglucomutase]]
-
[[Category: Salmonella typhimurium]]
+
[[Category: Salty]]
-
[[Category: Single protein]]
+
[[Category: Collart, F]]
-
[[Category: Collart, F.]]
+
[[Category: Holzle, D]]
-
[[Category: Holzle, D.]]
+
[[Category: Joachimiak, A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Structural genomic]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Osipiuk, J]]
-
[[Category: Osipiuk, J.]]
+
[[Category: Wu, R]]
-
[[Category: Wu, R.]]
+
[[Category: Isomerase]]
-
[[Category: mcsg]]
+
[[Category: Mcsg]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: phosphoglucomutase]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:08:00 2008''
+

Current revision

Phosphoglucomutase from Salmonella typhimurium.

PDB ID 2fuv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools