This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5of2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:47, 13 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==The structural versatility of TasA in B. subtilis biofilm formation==
==The structural versatility of TasA in B. subtilis biofilm formation==
-
<StructureSection load='5of2' size='340' side='right' caption='[[5of2]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
+
<StructureSection load='5of2' size='340' side='right'caption='[[5of2]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5of2]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OF2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OF2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5of2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OF2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OF2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5of2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5of2 OCA], [http://pdbe.org/5of2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5of2 RCSB], [http://www.ebi.ac.uk/pdbsum/5of2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5of2 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5of2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5of2 OCA], [https://pdbe.org/5of2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5of2 RCSB], [https://www.ebi.ac.uk/pdbsum/5of2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5of2 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TASA_BACSU TASA_BACSU] TasA is the major protein component of the biofilm extracellular matrix (PubMed:16430696, PubMed:20080671). It forms amyloid fibers that bind cells together in the biofilm (PubMed:20080671). Exhibits an antibacterial activity against a variety of Gram-positive and Gram-negative bacteria (PubMed:10049401). In laboratory strains, is also involved in proper spore coat assembly (PubMed:10368135).<ref>PMID:10049401</ref> <ref>PMID:10368135</ref> <ref>PMID:16430696</ref> <ref>PMID:20080671</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 19:
</div>
</div>
<div class="pdbe-citations 5of2" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5of2" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Akbey, U]]
+
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
-
[[Category: Ball, L]]
+
[[Category: Large Structures]]
-
[[Category: Chowdhury, A]]
+
[[Category: Akbey U]]
-
[[Category: Cremer, N]]
+
[[Category: Ball L]]
-
[[Category: Diehl, A]]
+
[[Category: Chowdhury A]]
-
[[Category: Eisenmenger, F]]
+
[[Category: Cremer N]]
-
[[Category: Heinemann, U]]
+
[[Category: Diehl A]]
-
[[Category: Hiller, M]]
+
[[Category: Eisenmenger F]]
-
[[Category: Kramer, R]]
+
[[Category: Heinemann U]]
-
[[Category: Leidert, M]]
+
[[Category: Hiller M]]
-
[[Category: Lopez, D]]
+
[[Category: Kramer R]]
-
[[Category: Moliere, N]]
+
[[Category: Leidert M]]
-
[[Category: Nagaraj, M]]
+
[[Category: Lopez D]]
-
[[Category: Oschkinat, H]]
+
[[Category: Moliere N]]
-
[[Category: Roske, Y]]
+
[[Category: Nagaraj M]]
-
[[Category: Schlegel, B]]
+
[[Category: Oschkinat H]]
-
[[Category: Schmieder, P]]
+
[[Category: Roske Y]]
-
[[Category: Stoeppler, D]]
+
[[Category: Schlegel B]]
-
[[Category: Turgay, K]]
+
[[Category: Schmieder P]]
-
[[Category: Worth, C L]]
+
[[Category: Stoeppler D]]
-
[[Category: Amyloid fiber]]
+
[[Category: Turgay K]]
-
[[Category: Biofilm matrix]]
+
[[Category: Worth CL]]
-
[[Category: Protein fibril]]
+
-
[[Category: Tasa]]
+
-
[[Category: Xray structure]]
+

Current revision

The structural versatility of TasA in B. subtilis biofilm formation

PDB ID 5of2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5of2"
Personal tools