1u5y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:30, 30 October 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of murine APRIL, pH 8.0==
==Crystal structure of murine APRIL, pH 8.0==
-
<StructureSection load='1u5y' size='340' side='right' caption='[[1u5y]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='1u5y' size='340' side='right'caption='[[1u5y]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1u5y]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U5Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1U5Y FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1u5y]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U5Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U5Y FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1u5x|1u5x]], [[1u5z|1u5z]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tnfsf13, APRIL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u5y OCA], [https://pdbe.org/1u5y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u5y RCSB], [https://www.ebi.ac.uk/pdbsum/1u5y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u5y ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1u5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u5y OCA], [http://pdbe.org/1u5y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1u5y RCSB], [http://www.ebi.ac.uk/pdbsum/1u5y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1u5y ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TNF13_MOUSE TNF13_MOUSE]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 14:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u5/1u5y_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u5/1u5y_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 29: Line 30:
==See Also==
==See Also==
-
*[[Tumor necrosis factor ligand superfamily|Tumor necrosis factor ligand superfamily]]
+
*[[Tumor necrosis factor ligand superfamily 3D structures|Tumor necrosis factor ligand superfamily 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Compaan, D M]]
+
[[Category: Mus musculus]]
-
[[Category: Hymowitz, S G]]
+
[[Category: Compaan DM]]
-
[[Category: Starovasnik, M A]]
+
[[Category: Hymowitz SG]]
-
[[Category: Wallweber, H J]]
+
[[Category: Starovasnik MA]]
-
[[Category: Cytokine]]
+
[[Category: Wallweber HJ]]
-
[[Category: Hormone-growth factor complex]]
+
-
[[Category: Jelly-roll]]
+
-
[[Category: Tnfsf]]
+
-
[[Category: Trimer]]
+

Current revision

Crystal structure of murine APRIL, pH 8.0

PDB ID 1u5y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools