This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1tkg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:31, 23 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with an analog of seryladenylate==
==Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with an analog of seryladenylate==
-
<StructureSection load='1tkg' size='340' side='right' caption='[[1tkg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
<StructureSection load='1tkg' size='340' side='right'caption='[[1tkg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1tkg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1TKG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1tkg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TKG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TKG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SSA:5-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE'>SSA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qf6|1qf6]], [[1tje|1tje]], [[1tke|1tke]], [[1tky|1tky]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SSA:5-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE'>SSA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">THRS, B1719, C2116, SF1512, S1630 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tkg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkg OCA], [https://pdbe.org/1tkg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tkg RCSB], [https://www.ebi.ac.uk/pdbsum/1tkg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkg ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Threonine--tRNA_ligase Threonine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.3 6.1.1.3] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tkg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tkg OCA], [http://pdbe.org/1tkg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1tkg RCSB], [http://www.ebi.ac.uk/pdbsum/1tkg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1tkg ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SYT_ECOLI SYT_ECOLI]] ThrS is also a translational repressor protein, it controls the translation of its own gene by binding to its mRNA.[HAMAP-Rule:MF_00184]
+
[https://www.uniprot.org/uniprot/SYT_ECOLI SYT_ECOLI] ThrS is also a translational repressor protein, it controls the translation of its own gene by binding to its mRNA.[HAMAP-Rule:MF_00184]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 33: Line 31:
==See Also==
==See Also==
-
*[[Aminoacyl tRNA Synthetase|Aminoacyl tRNA Synthetase]]
+
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: Threonine--tRNA ligase]]
+
[[Category: Large Structures]]
-
[[Category: Bey, G]]
+
[[Category: Bey G]]
-
[[Category: Caillet, J]]
+
[[Category: Caillet J]]
-
[[Category: Dock-Bregeon, A C]]
+
[[Category: Dock-Bregeon AC]]
-
[[Category: Moras, D]]
+
[[Category: Moras D]]
-
[[Category: Rees, B]]
+
[[Category: Rees B]]
-
[[Category: Torres-Larios, A]]
+
[[Category: Torres-Larios A]]
-
[[Category: Ligase]]
+

Current revision

Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with an analog of seryladenylate

PDB ID 1tkg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1tkg"
Personal tools