2gdq

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[[Image:2gdq.gif|left|200px]]
 
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{{Structure
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==Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution==
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|PDB= 2gdq |SIZE=350|CAPTION= <scene name='initialview01'>2gdq</scene>, resolution 1.800&Aring;
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<StructureSection load='2gdq' size='340' side='right'caption='[[2gdq]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[2gdq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GDQ FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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|GENE= yitF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=135461 Bacillus subtilis subsp. subtilis])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gdq OCA], [https://pdbe.org/2gdq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gdq RCSB], [https://www.ebi.ac.uk/pdbsum/2gdq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gdq ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2gdq TOPSAN]</span></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948 COG4948], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03316 MR_like]</span>
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</table>
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|RELATEDENTRY=[[1muc|1MUC]], [[1yey|1YEY]]
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gdq OCA], [http://www.ebi.ac.uk/pdbsum/2gdq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gdq RCSB]</span>
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[https://www.uniprot.org/uniprot/YITF_BACSU YITF_BACSU]
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gd/2gdq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gdq ConSurf].
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<div style="clear:both"></div>
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'''Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution'''
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==See Also==
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*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2GDQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis Bacillus subtilis subsp. subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GDQ OCA].
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[[Category: Bacillus subtilis subsp. subtilis str. 168]]
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[[Category: Bacillus subtilis subsp. subtilis]]
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[[Category: Large Structures]]
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[[Category: Single protein]]
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[[Category: Adams JM]]
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[[Category: Adams, J M.]]
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[[Category: Almo SC]]
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[[Category: Almo, S C.]]
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[[Category: Atwell S]]
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[[Category: Atwell, S.]]
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[[Category: Babbitt P]]
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[[Category: Babbitt, P.]]
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[[Category: Bain KT]]
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[[Category: Bain, K T.]]
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[[Category: Boice A]]
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[[Category: Boice, A.]]
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[[Category: Burley SK]]
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[[Category: Burley, S K.]]
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[[Category: Dickey M]]
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[[Category: Dickey, M.]]
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[[Category: Emtage S]]
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[[Category: Emtage, S.]]
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[[Category: Gerlt JA]]
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[[Category: Gerlt, J A.]]
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[[Category: Gheyi T]]
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[[Category: Gheyi, T.]]
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[[Category: Groshong C]]
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[[Category: Groshong, C.]]
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[[Category: Malashkevich VN]]
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[[Category: Malashkevich, V N.]]
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[[Category: Ozyurt S]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Pieper U]]
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[[Category: Ozyurt, S.]]
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[[Category: Powell A]]
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[[Category: Pieper, U.]]
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[[Category: Reyes C]]
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[[Category: Powell, A.]]
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[[Category: Rooney I]]
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[[Category: Reyes, C.]]
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[[Category: Rutter ME]]
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[[Category: Rooney, I.]]
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[[Category: Sali A]]
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[[Category: Rutter, M E.]]
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[[Category: Sauder JM]]
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[[Category: Sali, A.]]
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[[Category: Schwinn KD]]
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[[Category: Sauder, J M.]]
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[[Category: Thompson DA]]
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[[Category: Schwinn, K D.]]
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[[Category: Toro R]]
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[[Category: Thompson, D A.]]
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[[Category: Wasserman SR]]
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[[Category: Toro, R.]]
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[[Category: Wasserman, S R.]]
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[[Category: enolase]]
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[[Category: mandelate racemase/muconate lactonizing enzyme]]
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[[Category: new york structural genomix research consortium]]
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[[Category: nysgxrc]]
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[[Category: octamer]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomic]]
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[[Category: tim-barrel]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:15:16 2008''
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Current revision

Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution

PDB ID 2gdq

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OCA

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