2apf
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal Structure of the A52V/S54N/K66E variant of the murine T cell receptor V beta 8.2 domain== | ==Crystal Structure of the A52V/S54N/K66E variant of the murine T cell receptor V beta 8.2 domain== | ||
| - | <StructureSection load='2apf' size='340' side='right' caption='[[2apf]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='2apf' size='340' side='right'caption='[[2apf]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2apf]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2apf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2APF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2APF FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2apf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2apf OCA], [https://pdbe.org/2apf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2apf RCSB], [https://www.ebi.ac.uk/pdbsum/2apf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2apf ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A2NAI0_RAT A2NAI0_RAT] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 13: | Line 15: | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/2apf_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/2apf_consurf.spt"</scriptWhenChecked> | ||
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| Line 20: | Line 22: | ||
==See Also== | ==See Also== | ||
| - | *[[T-cell receptor|T-cell receptor]] | + | *[[T-cell receptor 3D structures|T-cell receptor 3D structures]] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Cho | + | [[Category: Rattus norvegicus]] |
| - | [[Category: Guan | + | [[Category: Cho S]] |
| - | [[Category: Kerzic | + | [[Category: Guan R]] |
| - | [[Category: Kieke | + | [[Category: Kerzic MC]] |
| - | [[Category: Kranz | + | [[Category: Kieke MC]] |
| - | [[Category: Mariuzza | + | [[Category: Kranz DM]] |
| - | [[Category: Sundberg | + | [[Category: Mariuzza RA]] |
| - | [[Category: Swaminathan | + | [[Category: Sundberg EJ]] |
| - | [[Category: Yang | + | [[Category: Swaminathan CP]] |
| - | + | [[Category: Yang J]] | |
| - | + | ||
Current revision
Crystal Structure of the A52V/S54N/K66E variant of the murine T cell receptor V beta 8.2 domain
| |||||||||||
Categories: Large Structures | Rattus norvegicus | Cho S | Guan R | Kerzic MC | Kieke MC | Kranz DM | Mariuzza RA | Sundberg EJ | Swaminathan CP | Yang J
