This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1vkf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:41, 25 January 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==CRYSTAL STRUCTURE OF A GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN (TM1436) FROM THERMOTOGA MARITIMA MSB8 AT 1.65 A RESOLUTION==
==CRYSTAL STRUCTURE OF A GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN (TM1436) FROM THERMOTOGA MARITIMA MSB8 AT 1.65 A RESOLUTION==
-
<StructureSection load='1vkf' size='340' side='right' caption='[[1vkf]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
+
<StructureSection load='1vkf' size='340' side='right'caption='[[1vkf]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1vkf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thema Thema]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VKF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1vkf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VKF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vkf OCA], [https://pdbe.org/1vkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vkf RCSB], [https://www.ebi.ac.uk/pdbsum/1vkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vkf ProSAT], [https://www.topsan.org/Proteins/JCSG/1vkf TOPSAN]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TM1436 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243274 THEMA])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vkf OCA], [http://pdbe.org/1vkf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vkf RCSB], [http://www.ebi.ac.uk/pdbsum/1vkf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vkf ProSAT], [http://www.topsan.org/Proteins/JCSG/1vkf TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9X1F0_THEMA Q9X1F0_THEMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thema]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Thermotoga maritima MSB8]]
-
[[Category: Glycerol uptake operon antiterminator-related protein]]
+
-
[[Category: Jcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Transcription]]
+

Current revision

CRYSTAL STRUCTURE OF A GLYCEROL UPTAKE OPERON ANTITERMINATOR-RELATED PROTEIN (TM1436) FROM THERMOTOGA MARITIMA MSB8 AT 1.65 A RESOLUTION

PDB ID 1vkf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools