1w6w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:37, 21 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==3D structure of CotA incubated with sodium azide==
==3D structure of CotA incubated with sodium azide==
-
<StructureSection load='1w6w' size='340' side='right' caption='[[1w6w]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='1w6w' size='340' side='right'caption='[[1w6w]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1w6w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W6W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1W6W FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1w6w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W6W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W6W FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1gsk|1gsk]], [[1hkp|1hkp]], [[1hkz|1hkz]], [[1hl0|1hl0]], [[1hl1|1hl1]], [[1of0|1of0]], [[1ogr|1ogr]], [[1uvw|1uvw]], [[1w6l|1w6l]], [[1w8e|1w8e]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1w6w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w6w OCA], [http://pdbe.org/1w6w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1w6w RCSB], [http://www.ebi.ac.uk/pdbsum/1w6w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1w6w ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w6w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w6w OCA], [https://pdbe.org/1w6w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w6w RCSB], [https://www.ebi.ac.uk/pdbsum/1w6w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w6w ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/COTA_BACSU COTA_BACSU]] Involved in brown pigmentation during sporogenesis.
+
[https://www.uniprot.org/uniprot/COTA_BACSU COTA_BACSU] Involved in brown pigmentation during sporogenesis.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w6/1w6w_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w6/1w6w_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 31: Line 31:
==See Also==
==See Also==
-
*[[CotA laccase|CotA laccase]]
+
*[[Laccase 3D structures|Laccase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Vibrio subtilis ehrenberg 1835]]
+
[[Category: Bacillus subtilis]]
-
[[Category: Bento, I]]
+
[[Category: Large Structures]]
-
[[Category: Carrondo, M A]]
+
[[Category: Bento I]]
-
[[Category: Lindley, P F]]
+
[[Category: Carrondo MA]]
-
[[Category: Lopes, G G]]
+
[[Category: Lindley PF]]
-
[[Category: Martins, L O]]
+
[[Category: Lopes GG]]
-
[[Category: Laccase]]
+
[[Category: Martins LO]]
-
[[Category: Multicopper-oxidase]]
+
-
[[Category: Oxidase]]
+
-
[[Category: Oxygen reduction]]
+

Current revision

3D structure of CotA incubated with sodium azide

PDB ID 1w6w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools