2gqu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:52, 13 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gqu.jpg|left|200px]]
 
-
{{Structure
+
==Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus==
-
|PDB= 2gqu |SIZE=350|CAPTION= <scene name='initialview01'>2gqu</scene>, resolution 1.60&Aring;
+
<StructureSection load='2gqu' size='340' side='right'caption='[[2gqu]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=EPU:URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL)+BUTYRIC+ACID'>EPU</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>
+
<table><tr><td colspan='2'>[[2gqu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQU FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/UDP-N-acetylmuramate_dehydrogenase UDP-N-acetylmuramate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.158 1.1.1.158] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPU:URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL)+BUTYRIC+ACID'>EPU</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqu OCA], [https://pdbe.org/2gqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqu RCSB], [https://www.ebi.ac.uk/pdbsum/2gqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqu ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[2gqt|2GQT]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqu OCA], [http://www.ebi.ac.uk/pdbsum/2gqu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gqu RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/MURB_THET8 MURB_THET8] Cell wall formation.[HAMAP-Rule:MF_00037]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqu_consurf.spt"</scriptWhenChecked>
-
2GQU is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Thermus_caldophilus Thermus caldophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQU OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==Reference==
+
</jmolCheckbox>
-
Crystal structure of UDP-N-acetylenolpyruvylglucosamine reductase (MurB) from Thermus caldophilus., Kim MK, Cho MK, Song HE, Kim D, Park BH, Lee JH, Kang GB, Kim SH, Im YJ, Lee DS, Eom SH, Proteins. 2007 Feb 15;66(3):751-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17120230 17120230]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqu ConSurf].
-
[[Category: Protein complex]]
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermus caldophilus]]
[[Category: Thermus caldophilus]]
-
[[Category: UDP-N-acetylmuramate dehydrogenase]]
+
[[Category: Eom SH]]
-
[[Category: Eom, S H.]]
+
[[Category: Kim M-K]]
-
[[Category: Kim, M K.]]
+
-
[[Category: enolpyruvyl-udp-n-acetylglucosamine]]
+
-
[[Category: enzyme]]
+
-
[[Category: flavin adenine dinucleotide]]
+
-
[[Category: peptidoglycan biosynthesis]]
+
-
[[Category: substrate complex]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:20:18 2008''
+

Current revision

Crystal Structure of UDP-N-Acetylenolpyruvylglucosamine Reductase (MurB) from Thermus caldophilus

PDB ID 2gqu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gqu"
Personal tools