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| ==A mutant of Trypanosoma rangeli sialidase displaying trans-sialidase activity== | | ==A mutant of Trypanosoma rangeli sialidase displaying trans-sialidase activity== |
- | <StructureSection load='1wcs' size='340' side='right' caption='[[1wcs]], [[Resolution|resolution]] 2.80Å' scene=''> | + | <StructureSection load='1wcs' size='340' side='right'caption='[[1wcs]], [[Resolution|resolution]] 2.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1wcs]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Tryra Tryra]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WCS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WCS FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1wcs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_rangeli Trypanosoma rangeli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WCS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WCS FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1mz5|1mz5]], [[1mz6|1mz6]], [[1n1s|1n1s]], [[1n1t|1n1t]], [[1n1v|1n1v]], [[1n1y|1n1y]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Exo-alpha-sialidase Exo-alpha-sialidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.18 3.2.1.18] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wcs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wcs OCA], [https://pdbe.org/1wcs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wcs RCSB], [https://www.ebi.ac.uk/pdbsum/1wcs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wcs ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wcs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wcs OCA], [http://pdbe.org/1wcs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wcs RCSB], [http://www.ebi.ac.uk/pdbsum/1wcs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wcs ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/O44049_TRYRA O44049_TRYRA] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| <jmolCheckbox> | | <jmolCheckbox> |
| <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wc/1wcs_consurf.spt"</scriptWhenChecked> | | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wc/1wcs_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
| <text>to colour the structure by Evolutionary Conservation</text> | | <text>to colour the structure by Evolutionary Conservation</text> |
| </jmolCheckbox> | | </jmolCheckbox> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Exo-alpha-sialidase]] | + | [[Category: Large Structures]] |
- | [[Category: Tryra]]
| + | |
- | [[Category: Alzari, P M]]
| + | |
- | [[Category: Amaya, M F]]
| + | |
- | [[Category: Frasch, C]]
| + | |
- | [[Category: Nguyen, T]]
| + | |
- | [[Category: Paris, G]]
| + | |
- | [[Category: Ratier, L]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Protein engineering]]
| + | |
- | [[Category: Sialidase]]
| + | |
- | [[Category: Trans-sialidase]]
| + | |
- | [[Category: Trypanosoma cruzi]]
| + | |
| [[Category: Trypanosoma rangeli]] | | [[Category: Trypanosoma rangeli]] |
| + | [[Category: Alzari PM]] |
| + | [[Category: Amaya MF]] |
| + | [[Category: Frasch C]] |
| + | [[Category: Nguyen T]] |
| + | [[Category: Paris G]] |
| + | [[Category: Ratier L]] |
| Structural highlights
Function
O44049_TRYRA
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Trypanosoma cruzi, the agent of Chagas disease, expresses a modified sialidase, the trans-sialidase, which transfers sialic acid from host glycoconjugates to beta-galactose present in parasite mucins. Another American trypanosome, Trypanosoma rangeli, expresses a homologous protein that has sialidase activity but is devoid of transglycosidase activity. Based on the recently determined structures of T.rangeli sialidase (TrSA) and T.cruzi trans-sialidase (TcTS), we have now constructed mutants of TrSA with the aim of studying the relevant residues in transfer activity. Five mutations, Met96-Val, Ala98-Pro, Ser120-Tyr, Gly249-Tyr and Gln284-Pro, were enough to obtain a sialidase mutant (TrSA(5mut)) with trans-sialidase activity; and a sixth mutation increased the activity to about 10% that of wild-type TcTS. The crystal structure of TrSA(5mut) revealed the formation of a trans-sialidase-like binding site for the acceptor galactose, primarily defined by the phenol group of Tyr120 and the indole ring of Trp313, which adopts a new conformation, similar to that in TcTS, induced by the Gln284-Pro mutation. The transition state analogue 2,3-didehydro-2-deoxy-N-acetylneuraminic acid (DANA), which inhibits sialidases but is a poor inhibitor of trans-sialidase, was used to probe the active site conformation of mutant enzymes. The results show that the presence of a sugar acceptor binding-site, the fine-tuning of protein-substrate interactions and the flexibility of crucial active site residues are all important to achieve transglycosidase activity from the TrSA sialidase scaffold.
A sialidase mutant displaying trans-sialidase activity.,Paris G, Ratier L, Amaya MF, Nguyen T, Alzari PM, Frasch AC J Mol Biol. 2005 Jan 28;345(4):923-34. PMID:15588836[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Paris G, Ratier L, Amaya MF, Nguyen T, Alzari PM, Frasch AC. A sialidase mutant displaying trans-sialidase activity. J Mol Biol. 2005 Jan 28;345(4):923-34. PMID:15588836 doi:10.1016/j.jmb.2004.09.031
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