2guk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:05, 30 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2guk.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of the Conserved Protein of Unknown Function from Porphyromonas gingivalis==
-
|PDB= 2guk |SIZE=350|CAPTION= <scene name='initialview01'>2guk</scene>, resolution 1.91&Aring;
+
<StructureSection load='2guk' size='340' side='right'caption='[[2guk]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2guk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GUK FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
-
|GENE= PG1587, GeneID:2551814 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=837 Porphyromonas gingivalis])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09633 DUF2023]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2guk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2guk OCA], [https://pdbe.org/2guk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2guk RCSB], [https://www.ebi.ac.uk/pdbsum/2guk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2guk ProSAT], [https://www.topsan.org/Proteins/MCSG/2guk TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2guk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2guk OCA], [http://www.ebi.ac.uk/pdbsum/2guk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2guk RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q7MTT4_PORGI Q7MTT4_PORGI]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of the Conserved Protein of Unknown Function from Porphyromonas gingivalis'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2guk_consurf.spt"</scriptWhenChecked>
-
2GUK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUK OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Porphyromonas gingivalis]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2guk ConSurf].
-
[[Category: Kim, Y.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Moy, S.]]
+
</StructureSection>
-
[[Category: Quartey, P.]]
+
[[Category: Large Structures]]
-
[[Category: alpha-beta]]
+
[[Category: Porphyromonas gingivalis W83]]
-
[[Category: alpha-helical bundle]]
+
[[Category: Joachimiak A]]
-
[[Category: mcsg]]
+
[[Category: Kim Y]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Moy S]]
-
[[Category: protein structure initiative]]
+
[[Category: Quartey P]]
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:21:47 2008''
+

Current revision

Crystal Structure of the Conserved Protein of Unknown Function from Porphyromonas gingivalis

PDB ID 2guk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools