2gug

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:47, 30 August 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2gug.gif|left|200px]]
 
-
{{Structure
+
==NAD-dependent formate dehydrogenase from Pseudomonas sp.101 in complex with formate==
-
|PDB= 2gug |SIZE=350|CAPTION= <scene name='initialview01'>2gug</scene>, resolution 2.28&Aring;
+
<StructureSection load='2gug' size='340' side='right'caption='[[2gug]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>
+
<table><tr><td colspan='2'>[[2gug]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._101 Pseudomonas sp. 101]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GUG FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Formate_dehydrogenase Formate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.2 1.2.1.2] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.28&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gug FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gug OCA], [https://pdbe.org/2gug PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gug RCSB], [https://www.ebi.ac.uk/pdbsum/2gug PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gug ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[2nac|2NAC]], [[2nad|2NAD]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gug FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gug OCA], [http://www.ebi.ac.uk/pdbsum/2gug PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gug RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/FDH_PSESR FDH_PSESR]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2gug_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gug ConSurf].
 +
<div style="clear:both"></div>
-
'''NAD-dependent formate dehydrogenase from Pseudomonas sp.101 in complex with formate'''
+
==See Also==
-
 
+
*[[Formate dehydrogenase 3D structures|Formate dehydrogenase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2GUG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GUG OCA].
+
[[Category: Large Structures]]
-
[[Category: Formate dehydrogenase]]
+
[[Category: Pseudomonas sp. 101]]
-
[[Category: Pseudomonas sp.]]
+
[[Category: Boiko KM]]
-
[[Category: Single protein]]
+
[[Category: Filippova EV]]
-
[[Category: Boiko, K M.]]
+
[[Category: Polyakov KM]]
-
[[Category: Filippova, E V.]]
+
[[Category: Popov VO]]
-
[[Category: Polyakov, K M.]]
+
[[Category: Tikhonova TV]]
-
[[Category: Popov, V O.]]
+
[[Category: Tishkov VI]]
-
[[Category: Tikhonova, T V.]]
+
-
[[Category: Tishkov, V I.]]
+
-
[[Category: nad+(a))]]
+
-
[[Category: oxidoreductase (aldehude (d)]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:21:52 2008''
+

Current revision

NAD-dependent formate dehydrogenase from Pseudomonas sp.101 in complex with formate

PDB ID 2gug

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2gug"
Personal tools