Sandbox Reserved 1452

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{{Sandbox_Reserved_Telford2018}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
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<scene name='77/778332/1vax/1'>Text To Be Displayed</scene>{{Sandbox_Reserved_Telford2018}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
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==Your Heading Here (maybe something like 'Structure')==
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==Uricase==
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
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This is a default text for your page ''''''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
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Uricase is a hepatic enzyme meaning it is located in the liver and converts uric acid into allantoin. Allantoin is more efficiently excreted by the kidney because of how water soluble it is. However, in humans, a frameshift mutation during evolution affected the activity of the gene that encodes for uricase.
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You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
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== Function ==
== Function ==
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It is an enzyme that converts uric acid to allantoin. Allantoin is much more soluble than uric acid, and passes harmlessly from the body. Unfortunately, during evolution, humans have lost the ability to produce uricase. The detailed mechanism consists of a copper binding enzyme catalyzing the oxidation or uric acid to 5-hydroxyisourate and hydrogen peroxide followed by the hydrolysis and decarboxylation leading to the formation of the desired product, allantoin.
== Disease ==
== Disease ==
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If there is some damage to uricase or if it is absent in the body, it may be detrimental. Without a functioning uricase, there will be an excess amount of insoluble uric acid in the body which leads to a disease called gout. Gout is a form of inflammatory arthritis that develops in people who have high levels of uric acid in the blood. The acid forms needle-like crystals in joints and causes sudden, severe episodes of pain, redness, and swelling.
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Uric acid is a waste material made by the breakdown of purines. Purines are found in foods high in protein. Gout occurs when uric acid accumulates which happens when there is more intake of uric acid than excreted uric acid. This leads to acute gout. The immune system recognizes it as a foreign product and attacks it. This will then lead to inflammation. The joint could be damaged or bone erosion could occur when the join is attacked.
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== Cure ==
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There are many natural treatment options which include a decrease of purine intake, exercise, decrease smoking and alcohol intake, use of cherry juice (eliminate excess uric acid in blood). Another type of treatment available is gout therapy and medication. Pegloticase is a porcine uricase which is approved by the FDA for treatment of patients with gout. It must be administered by intravenous infusion every two weeks. Corticosteroids can also be taken by mouth or injected into an inflamed joint to relieve the pain and swelling of an acute gout attack. Corticosteroids and adrenocorticotropic hormones usually start working within 24 hours after corticosteroids have been taken.
== Relevance ==
== Relevance ==
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Uricase is an enzyme that catalyzes the conversion or uric acid to allantoin. Uric acid is
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an acidic waste product that your body passes through urine. It is a normal byproduct of the
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breakdown of foods that contain purines. Normally, the kidneys filter out uric acid from your
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blood; if too much builds up, it can lower the pH of your blood and urine and lead to a painful
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joint condition called gout and other complications. Interestingly, humans have naturally selected to
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terminate uricase. Because of the absence of uricase in humans, we may go through many
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complications caused by uric acid build up. Scientists are studying why natural selection would
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allow the accumulation of uric acid even though there are psychological complications of
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crystalized monosodium urate acutely causing liver and kidney damage or chronically causing
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gout.
== Structural highlights ==
== Structural highlights ==
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<scene name='77/778332/1vax/1'>This is the protein without a ligand</scene>
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Uricase is mainly located in the liver where it forms an elctron dense crystalline core in peroxisomes. It is a tetramer of identical subunits each containing copper binding sites. One of the four identical subunits of the enzyme can be viewed <scene name='77/778332/1vaxsubunit/1'>here</scene>. X-ray crystallography shows that uric acid binds to the active site as a monoanion and is deprotonated as a dianion which is then stabilized by <scene name='77/778332/1vax_substrate_binding/1'>Arg 176 and Gln 228.</scene> This specific enzyme is found in Aspergillus flavus which is a type of bacteria. Uricase can be inhibited by both cyanide and chloride ions. Oxonate competitively inhibits uricase.
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This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
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This is <scene name='77/778332/1vax/1'>uricase</scene> without a ligand.
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You can view uricase with a ligand <scene name='77/778332/4mb8/1'>here.</scene>
</StructureSection>
</StructureSection>
== References ==
== References ==
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<references/>
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Bonifacio, and Vicente. “Uric Acid and Evolution | Rheumatology | Oxford Academic.” OUP Academic, Oxford University Press, 13 July 2010, academic.oup.com/rheumatology/article/49/11/2010/1785765.
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Gabison, et al. “Near-Atomic Resolution Structures of Urate Oxidase Complexed with Its Substrate and Analogues: the Protonation State of the Ligand.” Acta Crystallogr.,Sect.D, www.rcsb.org/structure/3L8W.
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Hossain, et al. “Crystal Structure of Uricase from Arthrobacter Globiformis.” Acta Crystallogr.,Sect.D, www.rcsb.org/structure/1vax.
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Kratzer, James T., et al. “Evolutionary History and Metabolic Insights of Ancient Mammalian Uricases.” PNAS, National Academy of Sciences, 11 Mar. 2014, www.pnas.org/content/111/10/3763.short.
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Ortlund, E.o., and M.n. Murphy. “Evolutionary History and Metabolic Insights of Ancient Mammalian Uricases.” Evolutionary History and Metabolic Insights of Ancient Mammalian Uricases, 2014, doi:10.2210/pdb4mb8/pdb.

Current revision

This Sandbox is Reserved from Jan 22 through May 22, 2018 for use in the course Biochemistry II taught by Jason Telford at the Maryville University, St. Louis, Missouri, USA. This reservation includes Sandbox Reserved 1446 through Sandbox Reserved 1455.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
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More help: Help:Editing

Uricase

Caption for this structure

Drag the structure with the mouse to rotate

References

Bonifacio, and Vicente. “Uric Acid and Evolution | Rheumatology | Oxford Academic.” OUP Academic, Oxford University Press, 13 July 2010, academic.oup.com/rheumatology/article/49/11/2010/1785765.

Gabison, et al. “Near-Atomic Resolution Structures of Urate Oxidase Complexed with Its Substrate and Analogues: the Protonation State of the Ligand.” Acta Crystallogr.,Sect.D, www.rcsb.org/structure/3L8W.

Hossain, et al. “Crystal Structure of Uricase from Arthrobacter Globiformis.” Acta Crystallogr.,Sect.D, www.rcsb.org/structure/1vax.

Kratzer, James T., et al. “Evolutionary History and Metabolic Insights of Ancient Mammalian Uricases.” PNAS, National Academy of Sciences, 11 Mar. 2014, www.pnas.org/content/111/10/3763.short.

Ortlund, E.o., and M.n. Murphy. “Evolutionary History and Metabolic Insights of Ancient Mammalian Uricases.” Evolutionary History and Metabolic Insights of Ancient Mammalian Uricases, 2014, doi:10.2210/pdb4mb8/pdb.

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