This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2hay
From Proteopedia
(Difference between revisions)
| (10 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2hay.gif|left|200px]] | ||
| - | + | ==The Crystal Structure of the Putative NAD(P)H-Flavin Oxidoreductase from Streptococcus pyogenes M1 GAS== | |
| - | + | <StructureSection load='2hay' size='340' side='right'caption='[[2hay]], [[Resolution|resolution]] 2.11Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2hay]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Strp1 Strp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HAY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HAY FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | | | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hay OCA], [https://pdbe.org/2hay PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hay RCSB], [https://www.ebi.ac.uk/pdbsum/2hay PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hay ProSAT], [https://www.topsan.org/Proteins/MCSG/2hay TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/2hay_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | == | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hay ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: Clancy, S | + | __TOC__ |
| - | [[Category: Duggan, E | + | </StructureSection> |
| - | [[Category: Joachimiak, A | + | [[Category: Large Structures]] |
| - | [[Category: Kim, Y | + | [[Category: Strp1]] |
| - | [[Category: | + | [[Category: Clancy, S]] |
| - | [[Category: | + | [[Category: Duggan, E]] |
| - | [[Category: | + | [[Category: Joachimiak, A]] |
| - | [[Category: | + | [[Category: Kim, Y]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | + | [[Category: Alpha-beta structure]] | |
| - | + | [[Category: Mcsg]] | |
| - | + | [[Category: Oxidoreductase]] | |
| - | + | [[Category: PSI, Protein structure initiative]] | |
Current revision
The Crystal Structure of the Putative NAD(P)H-Flavin Oxidoreductase from Streptococcus pyogenes M1 GAS
| |||||||||||
