6d3i
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6d3i is ON HOLD Authors: Rydel, T.J., Halls, C.E. Description: ftv7 dioxygenase with 2,4-D bound Category: Unreleased Structures [[Category: Ha...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==ftv7 dioxygenase with 2,4-D bound== | |
| + | <StructureSection load='6d3i' size='340' side='right'caption='[[6d3i]], [[Resolution|resolution]] 3.20Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6d3i]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingobium_herbicidovorans Sphingobium herbicidovorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D3I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6D3I FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.196Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=CFA:(2,4-DICHLOROPHENOXY)ACETIC+ACID'>CFA</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6d3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d3i OCA], [https://pdbe.org/6d3i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6d3i RCSB], [https://www.ebi.ac.uk/pdbsum/6d3i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6d3i ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RDPA_SPHHM RDPA_SPHHM] Involved in the degradation of the phenoxypropionate herbicides. Catalyzes the enantiospecific cleavage of the ether bond in the herbicid R-dichlorprop ((R)-2-(2,4-dichlorophenoxy)propionate)(R-2,4-DP) and R-mecoprop ((R)-2-(4-chloro-2-methylphenoxy)propionate)(R-2,4-MCPP). It can also accept (RS)-4-chlorophenoxypropanoate, however it can only accept 2-oxoglutarate as oxygen acceptor.<ref>PMID:16731970</ref> <ref>PMID:16820480</ref> <ref>PMID:11423952</ref> | ||
| - | + | ==See Also== | |
| - | + | *[[Dioxygenase 3D structures|Dioxygenase 3D structures]] | |
| - | + | == References == | |
| - | [[Category: | + | <references/> |
| - | [[Category: Halls | + | __TOC__ |
| - | [[Category: Rydel | + | </StructureSection> |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Sphingobium herbicidovorans]] | ||
| + | [[Category: Halls CE]] | ||
| + | [[Category: Rydel TJ]] | ||
Current revision
ftv7 dioxygenase with 2,4-D bound
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