This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hfq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:01, 29 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hfq.gif|left|200px]]
 
-
{{Structure
+
==NMR structure of protein NE1680 from Nitrosomonas europaea: Northeast Structural Genomics Consortium target NeT5==
-
|PDB= 2hfq |SIZE=350|CAPTION= <scene name='initialview01'>2hfq</scene>
+
<StructureSection load='2hfq' size='340' side='right'caption='[[2hfq]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2hfq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HFQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HFQ FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= NE1680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=915 Nitrosomonas europaea])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hfq OCA], [https://pdbe.org/2hfq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hfq RCSB], [https://www.ebi.ac.uk/pdbsum/2hfq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hfq ProSAT], [https://www.topsan.org/Proteins/NESGC/2hfq TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09630 DUF2024]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hfq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hfq OCA], [http://www.ebi.ac.uk/pdbsum/2hfq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2hfq RCSB]</span>
+
[https://www.uniprot.org/uniprot/Q82U33_NITEU Q82U33_NITEU]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''NMR structure of protein NE1680 from Nitrosomonas europaea: Northeast Structural Genomics Consortium target NeT5'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/2hfq_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2HFQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HFQ OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hfq ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Nitrosomonas europaea]]
[[Category: Nitrosomonas europaea]]
-
[[Category: Single protein]]
+
[[Category: Cort JR]]
-
[[Category: Cort, J R.]]
+
[[Category: Kennedy MA]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Lukin J]]
-
[[Category: Lukin, J.]]
+
[[Category: Yee AA]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Yim V]]
-
[[Category: Yee, A A.]]
+
-
[[Category: Yim, V.]]
+
-
[[Category: a/b protein]]
+
-
[[Category: nesg]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:29:46 2008''
+

Current revision

NMR structure of protein NE1680 from Nitrosomonas europaea: Northeast Structural Genomics Consortium target NeT5

PDB ID 2hfq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hfq"
Personal tools