This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yp2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:04, 15 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of potato tuber ADP-glucose pyrophosphorylase==
==Crystal structure of potato tuber ADP-glucose pyrophosphorylase==
-
<StructureSection load='1yp2' size='340' side='right' caption='[[1yp2]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
+
<StructureSection load='1yp2' size='340' side='right'caption='[[1yp2]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1yp2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Potato Potato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YP2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YP2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1yp2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_tuberosum Solanum tuberosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YP2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YP2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PMB:PARA-MERCURY-BENZENESULFONIC+ACID'>PMB</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucose-1-phosphate_adenylyltransferase Glucose-1-phosphate adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.27 2.7.7.27] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PMB:PARA-MERCURY-BENZENESULFONIC+ACID'>PMB</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yp2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yp2 OCA], [http://pdbe.org/1yp2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1yp2 RCSB], [http://www.ebi.ac.uk/pdbsum/1yp2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1yp2 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yp2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yp2 OCA], [https://pdbe.org/1yp2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yp2 RCSB], [https://www.ebi.ac.uk/pdbsum/1yp2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yp2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GLGS_SOLTU GLGS_SOLTU]] This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
+
[https://www.uniprot.org/uniprot/GLGS_SOLTU GLGS_SOLTU] This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 33: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glucose-1-phosphate adenylyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: Potato]]
+
[[Category: Solanum tuberosum]]
-
[[Category: Ballicora, M A]]
+
[[Category: Ballicora MA]]
-
[[Category: Geiger, J H]]
+
[[Category: Geiger JH]]
-
[[Category: Jin, X]]
+
[[Category: Jin X]]
-
[[Category: Preiss, J]]
+
[[Category: Preiss J]]
-
[[Category: Adp-glucose pyrophosphorylase]]
+
-
[[Category: Adp-glucose synthase]]
+
-
[[Category: Agpase b]]
+
-
[[Category: Alpha-d-glucose-1-phosphate adenyl transferase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of potato tuber ADP-glucose pyrophosphorylase

PDB ID 1yp2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yp2"
Personal tools