1y7k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:41, 21 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==NMR structure family of Human Agouti Signalling Protein (80-132: Q115Y, S124Y)==
==NMR structure family of Human Agouti Signalling Protein (80-132: Q115Y, S124Y)==
-
<StructureSection load='1y7k' size='340' side='right' caption='[[1y7k]], [[NMR_Ensembles_of_Models | 21 NMR models]]' scene=''>
+
<StructureSection load='1y7k' size='340' side='right'caption='[[1y7k]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1y7k]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y7K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Y7K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1y7k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y7K FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1y7j|1y7j]], [[1hyk|1hyk]], [[1mr0|1mr0]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 21 models</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y7k OCA], [http://pdbe.org/1y7k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1y7k RCSB], [http://www.ebi.ac.uk/pdbsum/1y7k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1y7k ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y7k OCA], [https://pdbe.org/1y7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y7k RCSB], [https://www.ebi.ac.uk/pdbsum/1y7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y7k ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ASIP_HUMAN ASIP_HUMAN]] Involved in the regulation of melanogenesis. The binding of ASP to MC1R precludes alpha-MSH initiated signaling and thus blocks production of cAMP, leading to a down-regulation of eumelanogenesis (brown/black pigment) and thus increasing synthesis of pheomelanin (yellow/red pigment). In higher primates, agouti may affect the quality of hair pigmentation rather than its pattern of deposition. Could well play a role in neuroendocrine aspects of melanocortin action. May have some functional role in regulating the lipid metabolism with adipocytes.
+
[https://www.uniprot.org/uniprot/ASIP_HUMAN ASIP_HUMAN] Involved in the regulation of melanogenesis. The binding of ASP to MC1R precludes alpha-MSH initiated signaling and thus blocks production of cAMP, leading to a down-regulation of eumelanogenesis (brown/black pigment) and thus increasing synthesis of pheomelanin (yellow/red pigment). In higher primates, agouti may affect the quality of hair pigmentation rather than its pattern of deposition. Could well play a role in neuroendocrine aspects of melanocortin action. May have some functional role in regulating the lipid metabolism with adipocytes.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 14:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y7/1y7k_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y7/1y7k_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 32: Line 32:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Barsh, G S]]
+
[[Category: Homo sapiens]]
-
[[Category: Chai, B]]
+
[[Category: Large Structures]]
-
[[Category: Dawson, P E]]
+
[[Category: Barsh GS]]
-
[[Category: Gantz, I]]
+
[[Category: Chai B]]
-
[[Category: Jackson, P J]]
+
[[Category: Dawson PE]]
-
[[Category: McNulty, J C]]
+
[[Category: Gantz I]]
-
[[Category: Millhauser, G L]]
+
[[Category: Jackson PJ]]
-
[[Category: Thompson, D A]]
+
[[Category: McNulty JC]]
-
[[Category: Cystine knot]]
+
[[Category: Millhauser GL]]
-
[[Category: Endogenous antagonist]]
+
[[Category: Thompson DA]]
-
[[Category: Gpcr]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Inverse agonist]]
+
-
[[Category: Melanocortin]]
+
-
[[Category: Signaling protein]]
+

Current revision

NMR structure family of Human Agouti Signalling Protein (80-132: Q115Y, S124Y)

PDB ID 1y7k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools