2ho4
From Proteopedia
(Difference between revisions)
| (10 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2ho4.gif|left|200px]] | ||
| - | + | ==Crystal Structure of Protein from Mouse Mm.236127== | |
| - | + | <StructureSection load='2ho4' size='340' side='right'caption='[[2ho4]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | | | + | <table><tr><td colspan='2'>[[2ho4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HO4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HO4 FirstGlance]. <br> |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | | | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Hdhd2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ho4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ho4 OCA], [https://pdbe.org/2ho4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ho4 RCSB], [https://www.ebi.ac.uk/pdbsum/2ho4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ho4 ProSAT], [https://www.topsan.org/Proteins/CESG/2ho4 TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ho/2ho4_consurf.spt"</scriptWhenChecked> | |
| - | == | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ho4 ConSurf]. |
| - | [[Category: Bingman, C A | + | <div style="clear:both"></div> |
| - | [[Category: Bitto, E | + | __TOC__ |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Lk3 transgenic mice]] |
| - | [[Category: Wesenberg, G E | + | [[Category: Bingman, C A]] |
| - | [[Category: | + | [[Category: Bitto, E]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | + | [[Category: McCoy, J G]] | |
| - | [[Category: | + | [[Category: Phillips, G N]] |
| - | [[Category: | + | [[Category: Wesenberg, G E]] |
| - | [[Category: | + | [[Category: Cesg]] |
| - | + | [[Category: Haloacid dehalogenase-like hydrolase domain containing 2]] | |
| - | + | [[Category: Hdhd2]] | |
| + | [[Category: Hydrolase]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
Current revision
Crystal Structure of Protein from Mouse Mm.236127
| |||||||||||
