|
|
(One intermediate revision not shown.) |
Line 1: |
Line 1: |
| | | |
| ==Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing== | | ==Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing== |
- | <StructureSection load='1zyi' size='340' side='right' caption='[[1zyi]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''> | + | <StructureSection load='1zyi' size='340' side='right'caption='[[1zyi]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1zyi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Canlf Canlf]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZYI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ZYI FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1zyi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_lupus_familiaris Canis lupus familiaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZYI FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CLNS1A, ICLN ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9615 CANLF])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zyi OCA], [http://pdbe.org/1zyi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1zyi RCSB], [http://www.ebi.ac.uk/pdbsum/1zyi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1zyi ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zyi OCA], [https://pdbe.org/1zyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zyi RCSB], [https://www.ebi.ac.uk/pdbsum/1zyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zyi ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/ICLN_CANLF ICLN_CANLF] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
Line 30: |
Line 32: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Canlf]] | + | [[Category: Canis lupus familiaris]] |
- | [[Category: Fuerst, J]] | + | [[Category: Large Structures]] |
- | [[Category: Gandini, R]] | + | [[Category: Fuerst J]] |
- | [[Category: Garavaglia, M L]] | + | [[Category: Gandini R]] |
- | [[Category: Gschwentner, M]] | + | [[Category: Garavaglia ML]] |
- | [[Category: Konrat, R]] | + | [[Category: Gschwentner M]] |
- | [[Category: Kontaxis, G]] | + | [[Category: Konrat R]] |
- | [[Category: Paulmichl, M]] | + | [[Category: Kontaxis G]] |
- | [[Category: Sarg, B]] | + | [[Category: Paulmichl M]] |
- | [[Category: Schedlbauer, A]] | + | [[Category: Sarg B]] |
- | [[Category: Siano, S]] | + | [[Category: Schedlbauer A]] |
- | [[Category: Cell volume regulation]]
| + | [[Category: Siano S]] |
- | [[Category: Icln]]
| + | |
- | [[Category: Ph domain]]
| + | |
- | [[Category: Rna splicing]]
| + | |
- | [[Category: Translation]]
| + | |
| Structural highlights
Function
ICLN_CANLF
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
ICln is a multifunctional protein involved in regulatory mechanisms as different as membrane ion transport and RNA splicing. The protein is water-soluble, and during regulatory volume decrease after cell swelling, it is able to migrate from the cytosol to the cell membrane. Purified, water-soluble ICln is able to insert into lipid bilayers to form ion channels. Here, we show that ICln159, a truncated ICln mutant, which is also able to form ion channels in lipid bilayers, belongs to the pleckstrin homology (PH) domain superfold family of proteins. The ICln PH domain shows unusual properties as it lacks the electrostatic surface polarization seen in classical PH domains. However, similar to many classical PH domain-containing proteins, ICln interacts with protein kinase C, and in addition, interacts with cAMP-dependent protein kinase and cGMP-dependent protein kinase type II but not cGMP-dependent protein kinase type Ibeta. A major phosphorylation site for all three kinases is Ser-45 within the ICln PH domain. Furthermore, ICln159 interacts with LSm4, a protein involved in splicing and mRNA degradation, suggesting that the ICln159 PH domain may serve as a protein-protein interaction platform.
ICln159 folds into a pleckstrin homology domain-like structure. Interaction with kinases and the splicing factor LSm4.,Furst J, Schedlbauer A, Gandini R, Garavaglia ML, Saino S, Gschwentner M, Sarg B, Lindner H, Jakab M, Ritter M, Bazzini C, Botta G, Meyer G, Kontaxis G, Tilly BC, Konrat R, Paulmichl M J Biol Chem. 2005 Sep 2;280(35):31276-82. Epub 2005 May 19. PMID:15905169[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Furst J, Schedlbauer A, Gandini R, Garavaglia ML, Saino S, Gschwentner M, Sarg B, Lindner H, Jakab M, Ritter M, Bazzini C, Botta G, Meyer G, Kontaxis G, Tilly BC, Konrat R, Paulmichl M. ICln159 folds into a pleckstrin homology domain-like structure. Interaction with kinases and the splicing factor LSm4. J Biol Chem. 2005 Sep 2;280(35):31276-82. Epub 2005 May 19. PMID:15905169 doi:10.1074/jbc.M500541200
|