2arx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:34, 9 October 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Pterocarpus angolensis seed lectin in complex with the decasaccharide NA2F==
==Pterocarpus angolensis seed lectin in complex with the decasaccharide NA2F==
-
<StructureSection load='2arx' size='340' side='right' caption='[[2arx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='2arx' size='340' side='right'caption='[[2arx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2arx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pterocarpus_angolensis Pterocarpus angolensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ARX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2arx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pterocarpus_angolensis Pterocarpus angolensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ARX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ar6|2ar6]], [[2arb|2arb]], [[2are|2are]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PRD_900112:3alpha-alpha-mannobiose'>PRD_900112</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2arx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2arx OCA], [http://pdbe.org/2arx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2arx RCSB], [http://www.ebi.ac.uk/pdbsum/2arx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2arx ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2arx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2arx OCA], [https://pdbe.org/2arx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2arx RCSB], [https://www.ebi.ac.uk/pdbsum/2arx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2arx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8GSD2_PTEAG Q8GSD2_PTEAG]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ar/2arx_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ar/2arx_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 34: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pterocarpus angolensis]]
[[Category: Pterocarpus angolensis]]
-
[[Category: Amiot, N]]
+
[[Category: Amiot N]]
-
[[Category: Boons, G J]]
+
[[Category: Boons G-J]]
-
[[Category: Buts, L]]
+
[[Category: Buts L]]
-
[[Category: Garcia-Pino, A]]
+
[[Category: Garcia-Pino A]]
-
[[Category: Imberty, A]]
+
[[Category: Imberty A]]
-
[[Category: Lah, J]]
+
[[Category: Lah J]]
-
[[Category: Loris, R]]
+
[[Category: Loris R]]
-
[[Category: Versees, W]]
+
[[Category: Versees W]]
-
[[Category: Wyns, L]]
+
[[Category: Wyns L]]
-
[[Category: Carbohydrate]]
+
-
[[Category: Lectin]]
+
-
[[Category: Legume lectin]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Pterocarpus angolensis seed lectin in complex with the decasaccharide NA2F

PDB ID 2arx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2arx"
Personal tools