5xm2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:19, 27 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Human N-terminal domain of FACT complex subunit SPT16==
==Human N-terminal domain of FACT complex subunit SPT16==
-
<StructureSection load='5xm2' size='340' side='right' caption='[[5xm2]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
+
<StructureSection load='5xm2' size='340' side='right'caption='[[5xm2]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5xm2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XM2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5XM2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5xm2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XM2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XM2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.187&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5xm2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xm2 OCA], [http://pdbe.org/5xm2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xm2 RCSB], [http://www.ebi.ac.uk/pdbsum/5xm2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xm2 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xm2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xm2 OCA], [https://pdbe.org/5xm2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xm2 RCSB], [https://www.ebi.ac.uk/pdbsum/5xm2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xm2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SP16H_HUMAN SP16H_HUMAN]] Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II. The FACT complex is probably also involved in phosphorylation of 'Ser-392' of p53/TP53 via its association with CK2 (casein kinase II).<ref>PMID:10912001</ref> <ref>PMID:11239457</ref> <ref>PMID:12934006</ref> <ref>PMID:16713563</ref> <ref>PMID:9489704</ref> <ref>PMID:9836642</ref>
+
[https://www.uniprot.org/uniprot/SP16H_HUMAN SP16H_HUMAN] Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II. The FACT complex is probably also involved in phosphorylation of 'Ser-392' of p53/TP53 via its association with CK2 (casein kinase II).<ref>PMID:10912001</ref> <ref>PMID:11239457</ref> <ref>PMID:12934006</ref> <ref>PMID:16713563</ref> <ref>PMID:9489704</ref> <ref>PMID:9836642</ref>
 +
 
 +
==See Also==
 +
*[[Elongation factor 3D structures|Elongation factor 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chen, Y]]
+
[[Category: Homo sapiens]]
-
[[Category: Dou, Y]]
+
[[Category: Large Structures]]
-
[[Category: Jiang, H]]
+
[[Category: Chen Y]]
-
[[Category: Li, H]]
+
[[Category: Dou Y]]
-
[[Category: Lu, D]]
+
[[Category: Jiang H]]
-
[[Category: Su, D]]
+
[[Category: Li H]]
-
[[Category: Wang, M]]
+
[[Category: Lu D]]
-
[[Category: Xu, S]]
+
[[Category: Su D]]
-
[[Category: Dna damage repair]]
+
[[Category: Wang M]]
-
[[Category: Fact subunit]]
+
[[Category: Xu S]]
-
[[Category: Histone chaperone]]
+
-
[[Category: Spt16n]]
+
-
[[Category: Transcription]]
+

Current revision

Human N-terminal domain of FACT complex subunit SPT16

PDB ID 5xm2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools