6bt2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:24, 13 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Structure of the human Nocturnin catalytic domain with bound sulfate anion==
==Structure of the human Nocturnin catalytic domain with bound sulfate anion==
-
<StructureSection load='6bt2' size='340' side='right' caption='[[6bt2]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
+
<StructureSection load='6bt2' size='340' side='right'caption='[[6bt2]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6bt2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BT2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BT2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6bt2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BT2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.411&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6bt1|6bt1]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Poly(A)-specific_ribonuclease Poly(A)-specific ribonuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.13.4 3.1.13.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6bt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bt2 OCA], [https://pdbe.org/6bt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6bt2 RCSB], [https://www.ebi.ac.uk/pdbsum/6bt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6bt2 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bt2 OCA], [http://pdbe.org/6bt2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bt2 RCSB], [http://www.ebi.ac.uk/pdbsum/6bt2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bt2 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NOCT_HUMAN NOCT_HUMAN]] Circadian deadenylase which plays an important role in post-transcriptional regulation of metabolic genes under circadian control. Degrades poly(A) tails of specific target mRNAs leading to their degradation and suppression of translation. Exerts a rhythmic post-transcriptional control of genes necessary for metabolic functions including nutrient absorption, glucose/insulin sensitivity, lipid metabolism, adipogenesis, inflammation and osteogenesis. Plays an important role in favoring adipogenesis over osteoblastogenesis and acts as a key regulator of the adipogenesis/osteogenesis balance. Promotes adipogenesis by activating PPARG transcriptional activity in a deadenylase-independent manner by facilitating its nuclear translocation. Regulates circadian expression of NOS2 in the liver and negatively regulates the circadian expression of IGF1 in the bone. Critical for proper development of early embryos (By similarity).
+
[https://www.uniprot.org/uniprot/NOCT_HUMAN NOCT_HUMAN] Circadian deadenylase which plays an important role in post-transcriptional regulation of metabolic genes under circadian control. Degrades poly(A) tails of specific target mRNAs leading to their degradation and suppression of translation. Exerts a rhythmic post-transcriptional control of genes necessary for metabolic functions including nutrient absorption, glucose/insulin sensitivity, lipid metabolism, adipogenesis, inflammation and osteogenesis. Plays an important role in favoring adipogenesis over osteoblastogenesis and acts as a key regulator of the adipogenesis/osteogenesis balance. Promotes adipogenesis by activating PPARG transcriptional activity in a deadenylase-independent manner by facilitating its nuclear translocation. Regulates circadian expression of NOS2 in the liver and negatively regulates the circadian expression of IGF1 in the bone. Critical for proper development of early embryos (By similarity).
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Abshire, E T]]
+
[[Category: Homo sapiens]]
-
[[Category: Chasseur, J]]
+
[[Category: Large Structures]]
-
[[Category: Rizzo, P Del]]
+
[[Category: Abshire ET]]
-
[[Category: Trievel, R]]
+
[[Category: Chasseur J]]
-
[[Category: Eep superfamily]]
+
[[Category: Del Rizzo P]]
-
[[Category: Hydrolase]]
+
[[Category: Trievel R]]
-
[[Category: Rna binding protein]]
+

Current revision

Structure of the human Nocturnin catalytic domain with bound sulfate anion

PDB ID 6bt2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools