2icp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:12, 30 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2icp.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of the bacterial antitoxin HigA from Escherichia coli at pH 4.0. Northeast Structural Genomics Consortium TARGET ER390.==
-
|PDB= 2icp |SIZE=350|CAPTION= <scene name='initialview01'>2icp</scene>, resolution 1.880&Aring;
+
<StructureSection load='2icp' size='340' side='right'caption='[[2icp]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2icp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_CFT073 Escherichia coli CFT073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ICP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ICP FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
-
|GENE= higa ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3093 VapI]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2icp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2icp OCA], [https://pdbe.org/2icp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2icp RCSB], [https://www.ebi.ac.uk/pdbsum/2icp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2icp ProSAT], [https://www.topsan.org/Proteins/NESGC/2icp TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2icp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2icp OCA], [http://www.ebi.ac.uk/pdbsum/2icp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2icp RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/YDDM_ECOL6 YDDM_ECOL6]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of the bacterial antitoxin HigA from Escherichia coli at pH 4.0. Northeast Structural Genomics Consortium TARGET ER390.'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/2icp_consurf.spt"</scriptWhenChecked>
-
2ICP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ICP OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Escherichia coli]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Abashidze, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2icp ConSurf].
-
[[Category: Acton, T B.]]
+
<div style="clear:both"></div>
-
[[Category: Arbing, M A.]]
+
__TOC__
-
[[Category: Baran, M C.]]
+
</StructureSection>
-
[[Category: Cunningham, K.]]
+
[[Category: Escherichia coli CFT073]]
-
[[Category: Hunt, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Hurley, J M.]]
+
[[Category: Abashidze M]]
-
[[Category: Inouye, M.]]
+
[[Category: Acton TB]]
-
[[Category: Janjua, H.]]
+
[[Category: Arbing MA]]
-
[[Category: Liu, J.]]
+
[[Category: Baran MC]]
-
[[Category: Ma, L C.]]
+
[[Category: Cunningham K]]
-
[[Category: Montelione, G T.]]
+
[[Category: Hunt JF]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Hurley JM]]
-
[[Category: Rost, B.]]
+
[[Category: Inouye M]]
-
[[Category: Woychik, N A.]]
+
[[Category: Janjua H]]
-
[[Category: Xiao, R.]]
+
[[Category: Liu J]]
-
[[Category: Zhao, L.]]
+
[[Category: Ma LC]]
-
[[Category: helix-turn-helix]]
+
[[Category: Montelione GT]]
-
[[Category: nesg]]
+
[[Category: Rost B]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Woychik NA]]
-
[[Category: protein structure initiative]]
+
[[Category: Xiao R]]
-
[[Category: psi-2]]
+
[[Category: Zhao L]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:42:28 2008''
+

Current revision

Crystal structure of the bacterial antitoxin HigA from Escherichia coli at pH 4.0. Northeast Structural Genomics Consortium TARGET ER390.

PDB ID 2icp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2icp"
Personal tools