2iex

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:53, 25 October 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2iex.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of dihydroxynapthoic acid synthetase (GK2873) from Geobacillus kaustophilus HTA426==
-
|PDB= 2iex |SIZE=350|CAPTION= <scene name='initialview01'>2iex</scene>, resolution 2.20&Aring;
+
<StructureSection load='2iex' size='340' side='right'caption='[[2iex]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2iex]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IEX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IEX FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Naphthoate_synthase Naphthoate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.3.36 4.1.3.36] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iex OCA], [https://pdbe.org/2iex PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iex RCSB], [https://www.ebi.ac.uk/pdbsum/2iex PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iex ProSAT], [https://www.topsan.org/Proteins/RSGI/2iex TOPSAN]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2iex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iex OCA], [http://www.ebi.ac.uk/pdbsum/2iex PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2iex RCSB]</span>
+
[https://www.uniprot.org/uniprot/Q5KVX8_GEOKA Q5KVX8_GEOKA]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of dihydroxynapthoic acid synthetase (GK2873) from Geobacillus kaustophilus HTA426'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ie/2iex_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2IEX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IEX OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Geobacillus kaustophilus]]
+
</jmolCheckbox>
-
[[Category: Naphthoate synthase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iex ConSurf].
-
[[Category: Single protein]]
+
<div style="clear:both"></div>
-
[[Category: BaBa, S.]]
+
__TOC__
-
[[Category: Ebihara, A.]]
+
</StructureSection>
-
[[Category: Jeyakanthan, J.]]
+
[[Category: Geobacillus kaustophilus HTA426]]
-
[[Category: Kanaujia, S P.]]
+
[[Category: Large Structures]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: BaBa S]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Ebihara A]]
-
[[Category: Ranjani, C Vasuki.]]
+
[[Category: Jeyakanthan J]]
-
[[Category: Sekar, K.]]
+
[[Category: Kanaujia SP]]
-
[[Category: Shinkai, A.]]
+
[[Category: Kuramitsu S]]
-
[[Category: Shiro, Y.]]
+
[[Category: Sekar K]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Shinkai A]]
-
[[Category: beta-beta-alpha]]
+
[[Category: Shiro Y]]
-
[[Category: coenzyme biosynthese]]
+
[[Category: Vasuki Ranjani C]]
-
[[Category: crotonase-like family]]
+
[[Category: Yokoyama S]]
-
[[Category: lyase]]
+
-
[[Category: naphthoate synthase]]
+
-
[[Category: national project on protein structural and functional analyse]]
+
-
[[Category: nppsfa]]
+
-
[[Category: riken structural genomics/proteomics initiative]]
+
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:43:25 2008''
+

Current revision

Crystal structure of dihydroxynapthoic acid synthetase (GK2873) from Geobacillus kaustophilus HTA426

PDB ID 2iex

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2iex"
Personal tools