6g90

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'''Unreleased structure'''
 
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The entry 6g90 is ON HOLD until Paper Publication
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==Prespliceosome structure provides insight into spliceosome assembly and regulation (map A2)==
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<SX load='6g90' size='340' side='right' viewer='molstar' caption='[[6g90]], [[Resolution|resolution]] 4.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6g90]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G90 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G90 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=N:ANY+5-MONOPHOSPHATE+NUCLEOTIDE'>N</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g90 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g90 OCA], [https://pdbe.org/6g90 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g90 RCSB], [https://www.ebi.ac.uk/pdbsum/6g90 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g90 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RU1A_YEAST RU1A_YEAST] Involved in nuclear mRNA splicing. The principal role of the U1A is to help fold or maintain U1 RNA in an active configuration. It is the first snRNP to interact with pre-mRNA. This interaction is required for the subsequent binding of U2 snRNP and the U4/U6/U5 tri-snRNP.<ref>PMID:8449403</ref> <ref>PMID:8849781</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The spliceosome catalyses the excision of introns from pre-mRNA in two steps, branching and exon ligation, and is assembled from five small nuclear ribonucleoprotein particles (snRNPs; U1, U2, U4, U5, U6) and numerous non-snRNP factors(1). For branching, the intron 5' splice site and the branch point sequence are selected and brought by the U1 and U2 snRNPs into the prespliceosome(1), which is a focal point for regulation by alternative splicing factors(2). The U4/U6.U5 tri-snRNP subsequently joins the prespliceosome to form the complete pre-catalytic spliceosome. Recent studies have revealed the structural basis of the branching and exon-ligation reactions(3), however, the structural basis of the early events in spliceosome assembly remains poorly understood(4). Here we report the cryo-electron microscopy structure of the yeast Saccharomyces cerevisiae prespliceosome at near-atomic resolution. The structure reveals an induced stabilization of the 5' splice site in the U1 snRNP, and provides structural insights into the functions of the human alternative splicing factors LUC7-like (yeast Luc7) and TIA-1 (yeast Nam8), both of which have been linked to human disease(5,6). In the prespliceosome, the U1 snRNP associates with the U2 snRNP through a stable contact with the U2 3' domain and a transient yeast-specific contact with the U2 SF3b-containing 5' region, leaving its tri-snRNP-binding interface fully exposed. The results suggest mechanisms for 5' splice site transfer to the U6 ACAGAGA region within the assembled spliceosome and for its subsequent conversion to the activation-competent B-complex spliceosome(7,8). Taken together, the data provide a working model to investigate the early steps of spliceosome assembly.
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Authors:
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Prespliceosome structure provides insights into spliceosome assembly and regulation.,Plaschka C, Lin PC, Charenton C, Nagai K Nature. 2018 Jul;559(7714):419-422. doi: 10.1038/s41586-018-0323-8. Epub 2018 Jul, 11. PMID:29995849<ref>PMID:29995849</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6g90" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Increased sodium tolerance protein|Increased sodium tolerance protein]]
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*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]]
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*[[Pre-mRNA splicing factors 3D structures|Pre-mRNA splicing factors 3D structures]]
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*[[Sm-like protein 3D structures|Sm-like protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Charenton C]]
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[[Category: Lin P-C]]
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[[Category: Nagai K]]
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[[Category: Plaschka C]]

Current revision

Prespliceosome structure provides insight into spliceosome assembly and regulation (map A2)

6g90, resolution 4.00Å

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