2ifa

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:24, 26 March 2025) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ifa.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.==
-
|PDB= 2ifa |SIZE=350|CAPTION= <scene name='initialview01'>2ifa</scene>, resolution 2.30&Aring;
+
<StructureSection load='2ifa' size='340' side='right'caption='[[2ifa]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2ifa]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IFA FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
|GENE= SMU.260 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1309 Streptococcus mutans])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02140 Nitroreductase_4]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ifa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ifa OCA], [https://pdbe.org/2ifa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ifa RCSB], [https://www.ebi.ac.uk/pdbsum/2ifa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ifa ProSAT], [https://www.topsan.org/Proteins/NESGC/2ifa TOPSAN]</span></td></tr>
-
|RELATEDENTRY=[[1yw3|1YW3]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ifa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ifa OCA], [http://www.ebi.ac.uk/pdbsum/2ifa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ifa RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q8DW21_STRMU Q8DW21_STRMU]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/2ifa_consurf.spt"</scriptWhenChecked>
-
2IFA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. This structure supersedes the now removed PDB entry 1YW3. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IFA OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Streptococcus mutans]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ifa ConSurf].
-
[[Category: Byler, T.]]
+
<div style="clear:both"></div>
-
[[Category: Chen, Y.]]
+
__TOC__
-
[[Category: Forouhar, F.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Ma, L C.]]
+
[[Category: Streptococcus mutans UA159]]
-
[[Category: Montelione, G T.]]
+
[[Category: Acton TB]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Byler T]]
-
[[Category: Tong, L.]]
+
[[Category: Chen Y]]
-
[[Category: Xiao, R.]]
+
[[Category: Forouhar F]]
-
[[Category: alpha-beta protein]]
+
[[Category: Hunt JF]]
-
[[Category: nesg]]
+
[[Category: Ma LC]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: protein structure initiative]]
+
[[Category: Tong L]]
-
[[Category: psi-2]]
+
[[Category: Xiao R]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:43:34 2008''
+

Current revision

Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.

PDB ID 2ifa

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ifa"
Personal tools