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| | ==Crystal structure of particulate methane monooxygenase from Methylomicrobium alcaliphilum 20Z== | | ==Crystal structure of particulate methane monooxygenase from Methylomicrobium alcaliphilum 20Z== |
| - | <StructureSection load='6cxh' size='340' side='right' caption='[[6cxh]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='6cxh' size='340' side='right'caption='[[6cxh]], [[Resolution|resolution]] 2.70Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6cxh]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Methylomicrobium_alcaliphilum_20z Methylomicrobium alcaliphilum 20z]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CXH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CXH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6cxh]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylotuvimicrobium_alcaliphilum_20Z Methylotuvimicrobium alcaliphilum 20Z]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CXH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CXH FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CM5:5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE'>CM5</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.704Å</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methane_monooxygenase_(soluble) Methane monooxygenase (soluble)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.13.25 1.14.13.25] </span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CM5:5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE'>CM5</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cxh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cxh OCA], [http://pdbe.org/6cxh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cxh RCSB], [http://www.ebi.ac.uk/pdbsum/6cxh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cxh ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6cxh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cxh OCA], [https://pdbe.org/6cxh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6cxh RCSB], [https://www.ebi.ac.uk/pdbsum/6cxh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6cxh ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/G4SZ64_META2 G4SZ64_META2] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </div> | | </div> |
| | <div class="pdbe-citations 6cxh" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 6cxh" style="background-color:#fffaf0;"></div> |
| | + | |
| | + | ==See Also== |
| | + | *[[Methane monooxygenase 3D structures|Methane monooxygenase 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Methylomicrobium alcaliphilum 20z]] | + | [[Category: Large Structures]] |
| - | [[Category: Ro, S Y]] | + | [[Category: Methylotuvimicrobium alcaliphilum 20Z]] |
| - | [[Category: Rosenzweig, A C]] | + | [[Category: Ro SY]] |
| - | [[Category: Copper dependent methane monooxygenase]] | + | [[Category: Rosenzweig AC]] |
| - | [[Category: Oxidoreductase]]
| + | |
| Structural highlights
Function
G4SZ64_META2
Publication Abstract from PubMed
Particulate methane monooxygenase (pMMO) is a copper-dependent, integral membrane metalloenzyme that converts methane to methanol in methanotrophic bacteria. Studies of isolated pMMO have been hindered by loss of enzymatic activity upon its removal from the native membrane. To characterize pMMO in a membrane-like environment, we reconstituted pMMOs from Methylococcus (Mcc.) capsulatus (Bath) and Methylomicrobium (Mm.) alcaliphilum 20Z into bicelles. Reconstitution into bicelles recovers methane oxidation activity lost upon detergent solubilization and purification without substantial alterations to copper content or copper electronic structure as observed by electron paramagnetic resonance (EPR) spectroscopy.. These findings suggest that loss of pMMO activity upon isolation is due to removal from the membranes rather than caused by loss of the catalytic copper ions. A 2.7 A resolution crystal structure of pMMO from Mm. alcaliphilum 20Z revealed a mononuclear copper center in the PmoB subunit and indicated that the transmembrane PmoC subunit may be conformationally flexible. Finally, results from extended X-ray absorption fine structure (EXAFS) analysis of pMMO from Mm. alcaliphilum 20Z were consistent with the observed monocopper center in the PmoB subunit. These results underscore the importance of studying membrane proteins in a membrane-like environment, and provide valuable insight into pMMO function.
From micelles to bicelles: Effect of the membrane on particulate methane monooxygenase activity.,Ro SY, Ross MO, Deng YW, Batelu S, Lawton TJ, Hurley JD, Stemmler TL, Hoffman BM, Rosenzweig AC J Biol Chem. 2018 May 8. pii: RA118.003348. doi: 10.1074/jbc.RA118.003348. PMID:29739854[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Ro SY, Ross MO, Deng YW, Batelu S, Lawton TJ, Hurley JD, Stemmler TL, Hoffman BM, Rosenzweig AC. From micelles to bicelles: Effect of the membrane on particulate methane monooxygenase activity. J Biol Chem. 2018 May 8. pii: RA118.003348. doi: 10.1074/jbc.RA118.003348. PMID:29739854 doi:http://dx.doi.org/10.1074/jbc.RA118.003348
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