2in5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:40, 9 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2in5.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of the hypothetical lipoprotein YmcC from Escherichia coli (K12), Northeast Structural Genomics target ER552.==
-
|PDB= 2in5 |SIZE=350|CAPTION= <scene name='initialview01'>2in5</scene>, resolution 2.30&Aring;
+
<StructureSection load='2in5' size='340' side='right'caption='[[2in5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2in5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IN5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IN5 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
|GENE= ymcC, b0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K12])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2in5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2in5 OCA], [https://pdbe.org/2in5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2in5 RCSB], [https://www.ebi.ac.uk/pdbsum/2in5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2in5 ProSAT], [https://www.topsan.org/Proteins/NESGC/2in5 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2in5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2in5 OCA], [http://www.ebi.ac.uk/pdbsum/2in5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2in5 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/GFCB_ECOLI GFCB_ECOLI]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of the hypothetical lipoprotein YmcC from Escherichia coli (K12), Northeast Structural Genomics target ER552.'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/in/2in5_consurf.spt"</scriptWhenChecked>
-
2IN5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IN5 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Escherichia coli k12]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2in5 ConSurf].
-
[[Category: Baran, M C.]]
+
<div style="clear:both"></div>
-
[[Category: Chen, C X.]]
+
__TOC__
-
[[Category: Cunningham, K.]]
+
</StructureSection>
-
[[Category: Forouhar, F.]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Hunt, J F.]]
+
[[Category: Large Structures]]
-
[[Category: Janjua, H.]]
+
[[Category: Acton TB]]
-
[[Category: Ma, L C.]]
+
[[Category: Baran MC]]
-
[[Category: Montelione, G T.]]
+
[[Category: Chen CX]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Cunningham K]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Forouhar F]]
-
[[Category: Tong, L.]]
+
[[Category: Hunt JF]]
-
[[Category: Xiao, R.]]
+
[[Category: Janjua H]]
-
[[Category: Zhou, W.]]
+
[[Category: Ma L-C]]
-
[[Category: mostly beta protein]]
+
[[Category: Montelione GT]]
-
[[Category: nesg]]
+
[[Category: Seetharaman J]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Tong L]]
-
[[Category: protein structure initiative]]
+
[[Category: Xiao R]]
-
[[Category: psi-2]]
+
[[Category: Zhou W]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:46:20 2008''
+

Current revision

Crystal Structure of the hypothetical lipoprotein YmcC from Escherichia coli (K12), Northeast Structural Genomics target ER552.

PDB ID 2in5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools