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5ygy

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==Crystal Structure of BACE1 in complex with (S)-N-(3-(2-amino-6-(fluoromethyl)-4 -methyl-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-cyanopicolinamide==
==Crystal Structure of BACE1 in complex with (S)-N-(3-(2-amino-6-(fluoromethyl)-4 -methyl-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-cyanopicolinamide==
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<StructureSection load='5ygy' size='340' side='right' caption='[[5ygy]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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<StructureSection load='5ygy' size='340' side='right'caption='[[5ygy]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5ygy]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YGY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YGY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5ygy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YGY FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0B6:~{N}-[3-[(4~{S})-2-azanyl-6-(fluoranylmethyl)-4-methyl-1,3-oxazin-4-yl]-4-fluoranyl-phenyl]-5-cyano-pyridine-2-carboxamide'>0B6</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0B6:~{N}-[3-[(4~{S})-2-azanyl-6-(fluoranylmethyl)-4-methyl-1,3-oxazin-4-yl]-4-fluoranyl-phenyl]-5-cyano-pyridine-2-carboxamide'>0B6</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ygy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ygy OCA], [http://pdbe.org/5ygy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ygy RCSB], [http://www.ebi.ac.uk/pdbsum/5ygy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ygy ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ygy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ygy OCA], [https://pdbe.org/5ygy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ygy RCSB], [https://www.ebi.ac.uk/pdbsum/5ygy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ygy ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/BACE1_HUMAN BACE1_HUMAN]] Responsible for the proteolytic processing of the amyloid precursor protein (APP). Cleaves at the N-terminus of the A-beta peptide sequence, between residues 671 and 672 of APP, leads to the generation and extracellular release of beta-cleaved soluble APP, and a corresponding cell-associated C-terminal fragment which is later released by gamma-secretase.<ref>PMID:10677483</ref> <ref>PMID:20354142</ref>
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[https://www.uniprot.org/uniprot/BACE1_HUMAN BACE1_HUMAN] Responsible for the proteolytic processing of the amyloid precursor protein (APP). Cleaves at the N-terminus of the A-beta peptide sequence, between residues 671 and 672 of APP, leads to the generation and extracellular release of beta-cleaved soluble APP, and a corresponding cell-associated C-terminal fragment which is later released by gamma-secretase.<ref>PMID:10677483</ref> <ref>PMID:20354142</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Memapsin 2]]
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[[Category: Homo sapiens]]
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[[Category: Ando, S]]
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[[Category: Large Structures]]
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[[Category: Borghys, H]]
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[[Category: Ando S]]
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[[Category: Dhuyvetter, D]]
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[[Category: Borghys H]]
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[[Category: Fuchino, K]]
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[[Category: Dhuyvetter D]]
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[[Category: Fukushima, T]]
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[[Category: Fuchino K]]
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[[Category: Gijsen, H]]
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[[Category: Fukushima T]]
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[[Category: Hiroyama, S]]
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[[Category: Gijsen H]]
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[[Category: Hosono, M]]
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[[Category: Hiroyama S]]
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[[Category: Iso, Y]]
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[[Category: Hosono M]]
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[[Category: Ito, H]]
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[[Category: Iso Y]]
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[[Category: Kido, Y]]
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[[Category: Ito H]]
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[[Category: Komano, K]]
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[[Category: Kido Y]]
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[[Category: Koyabu, K]]
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[[Category: Komano K]]
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[[Category: Kurose, N]]
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[[Category: Koyabu K]]
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[[Category: Kusakabe, K]]
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[[Category: Kurose N]]
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[[Category: Masui, M]]
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[[Category: Kusakabe K]]
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[[Category: Mitsuoka, Y]]
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[[Category: Masui M]]
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[[Category: Miyajima, H]]
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[[Category: Mitsuoka Y]]
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[[Category: Ogawa, M]]
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[[Category: Miyajima H]]
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[[Category: Ohnishi, S]]
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[[Category: Ogawa M]]
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[[Category: Sakaguchi, G]]
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[[Category: Ohnishi S]]
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[[Category: Unemura, C]]
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[[Category: Sakaguchi G]]
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[[Category: Yamamoto, T]]
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[[Category: Unemura C]]
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[[Category: Yamano, Y]]
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[[Category: Yamamoto T]]
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[[Category: Yoshida, S]]
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[[Category: Yamano Y]]
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[[Category: Beta-site amyloid precursor protein cleaving enzyme 1]]
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[[Category: Yoshida S]]
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[[Category: Hydrolase-inhibitor complex]]
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Current revision

Crystal Structure of BACE1 in complex with (S)-N-(3-(2-amino-6-(fluoromethyl)-4 -methyl-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-cyanopicolinamide

PDB ID 5ygy

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